RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
MBD4-208ENST00000509828 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 ZBTB22O15209 634 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 GDF11O95390 407 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
MBD4-208ENST00000509828 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
MBD4-208ENST00000509828 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 ERVK-24P63145 666 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 RRP1BQ14684 758 aaKnown RBP12.72□□□□□ -0.37
MBD4-208ENST00000509828 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
MBD4-208ENST00000509828 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
MBD4-208ENST00000509828 MEIS3Q99687 375 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 TXNRD2Q9NNW7 524 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 AATFQ9NY61 560 aaKnown RBP eCLIP12.72□□□□□ -0.37
MBD4-208ENST00000509828 RBPJLQ9UBG7 517 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 IVNS1ABPQ9Y6Y0 642 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
MBD4-208ENST00000509828 RANBP2P49792 3224 aaKnown RBP12.71□□□□□ -0.37
MBD4-208ENST00000509828 PFASO15067 1338 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 ZNF521Q96K83 1311 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
MBD4-208ENST00000509828 ATP2B2Q01814 1243 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 ZYXQ15942 572 aaKnown RBP12.71□□□□□ -0.37
MBD4-208ENST00000509828 CCL14Q16627 93 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 Q3C1V9 767 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 USP17L2Q6R6M4 530 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 APBA2Q99767 749 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 SAP30BPQ9UHR5 308 aaKnown RBP12.71□□□□□ -0.37
MBD4-208ENST00000509828 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
MBD4-208ENST00000509828 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
MBD4-208ENST00000509828 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
MBD4-208ENST00000509828 CCDC158Q5M9N0 1113 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
MBD4-208ENST00000509828 PORCNQ9H237 461 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
MBD4-208ENST00000509828 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 COL6A1P12109 1028 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 MORN1Q5T089 497 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 LHX8Q68G74 356 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
MBD4-208ENST00000509828 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
MBD4-208ENST00000509828 MSCO60682 206 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
MBD4-208ENST00000509828 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
MBD4-208ENST00000509828 MCAMP43121 646 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 USP5P45974 858 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 FAM109BQ6ICB4 259 aaPredicted RBP12.68□□□□□ -0.38
MBD4-208ENST00000509828 EMILIN3Q9NT22 766 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
MBD4-208ENST00000509828 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
MBD4-208ENST00000509828 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
MBD4-208ENST00000509828 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 GH2P01242 217 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 GNAI2P04899 355 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 USP14P54578 494 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 JAG1P78504 1218 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 DPP9Q86TI2 863 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 ARRDC4Q8NCT1 418 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 USP6NLQ92738 828 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 PRDM5Q9NQX1 630 aaPredicted RBP12.67□□□□□ -0.38
MBD4-208ENST00000509828 DDX20Q9UHI6 824 aaKnown RBP12.67□□□□□ -0.38
MBD4-208ENST00000509828 DOCK3Q8IZD9 2030 aa12.67□□□□□ -0.38
MBD4-208ENST00000509828 CUL9Q8IWT3 2517 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 PTPRFP10586 1907 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 FLT1P17948 1338 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
MBD4-208ENST00000509828 CYP7A1P22680 504 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 RTP1P59025 263 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 PPP4CP60510 307 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 PHIPQ8WWQ0 1821 aa12.66□□□□□ -0.38
MBD4-208ENST00000509828 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
MBD4-208ENST00000509828 PTPREP23469 700 aa12.65□□□□□ -0.38
MBD4-208ENST00000509828 CYP2C19P33261 490 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms