RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ESYT2A0FGR8 921 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 OPHN1O60890 802 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 CHGBP05060 677 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 ME1P48163 572 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 STX1BP61266 288 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 GNAI1P63096 354 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 FSTL1Q12841 308 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 CYTH1Q15438 398 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
USP53-205ENST00000509769 SHQ1Q6PI26 577 aaKnown RBP3.98□□□□□ -1.77
USP53-205ENST00000509769 MPRIPQ6WCQ1 1025 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 MORC4Q8TE76 937 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 TBC1D22AQ8WUA7 517 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 PHKBQ93100 1093 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 ATP6V1E2Q96A05 226 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 SDCCAG3Q96C92 435 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 C19orf60Q96EN9 201 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 CNBD2Q96M20 576 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 ECT2Q9H8V3 914 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 IL1RAPL2Q9NP60 686 aa3.98□□□□□ -1.77
USP53-205ENST00000509769 MORC2Q9Y6X9 1032 aaPredicted RBP3.98□□□□□ -1.77
USP53-205ENST00000509769 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.98□□□□□ -1.77
USP53-205ENST00000509769 XIRP1Q702N8 1843 aaKnown RBP3.98□□□□□ -1.77
USP53-205ENST00000509769 ASXL1Q8IXJ9 1541 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 MX1P20591 662 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 S100A1P23297 94 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SLC8A3P57103 927 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 MRPS35P82673 323 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 PRR23BQ6ZRT6 265 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 TRMT10CQ7L0Y3 403 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 PPP1R42Q7Z4L9 355 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SKAP1Q86WV1 359 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SYTL4Q96C24 671 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 TUBGCP3Q96CW5 907 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 CXorf56Q9H5V9 222 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 XAB2Q9HCS7 855 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 STOML1Q9UBI4 398 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SSX2IPQ9Y2D8 614 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 ATP6V0A2Q9Y487 856 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 INO80Q9ULG1 1556 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 EHBP1L1Q8N3D4 1523 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 IBTKQ9P2D0 1353 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 SUN1O94901 812 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 CHGAP10645 457 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 KRT3P12035 628 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 GUCY2CP25092 1073 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 RECQLP46063 649 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 ATN1P54259 1190 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 LAMC2Q13753 1193 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 PLCB4Q15147 1175 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SKIDA1Q1XH10 827 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 TADA2BQ86TJ2 420 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 STX19Q8N4C7 294 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 FBXO18Q8NFZ0 1043 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 ENOX1Q8TC92 643 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 LEO1Q8WVC0 666 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 MYO1AQ9UBC5 1043 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 DCDC2Q9UHG0 476 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 ARHGAP26Q9UNA1 814 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 KIDINS220Q9ULH0 1771 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 UBE4BO95155 1302 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 SYCE3A1L190 88 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 CCDC78A2IDD5 438 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 I3L4J1 428 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 FIBPO43427 364 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 POLR2EP19388 210 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 OAS2P29728 719 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 DEFA1P59665 94 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 DEFA3P59666 94 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 ZNF445P59923 1031 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 DAB2P98082 770 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 PPP1R7Q15435 360 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 RILPL1Q5EBL4 403 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 CAPRIN2Q6IMN6 1127 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 APBB1IPQ7Z5R6 666 aaPredicted RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 UBE2Q1Q7Z7E8 422 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 DDX42Q86XP3 938 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP53-205ENST00000509769 CCDC13Q8IYE1 715 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 TRMT44Q8IYL2 757 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 SNX29Q8TEQ0 813 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 PIK3R5Q8WYR1 880 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 MTRQ99707 1265 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 TRIM15Q9C019 465 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 WDR70Q9NW82 654 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 DBNLQ9UJU6 430 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 KDM2AQ9Y2K7 1162 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 ARL2BPQ9Y2Y0 163 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 USP19O94966 1318 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 MAFGO15525 162 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 RHOBTB1O94844 696 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 HNRNPCP07910 306 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP53-205ENST00000509769 NEK4P51957 841 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 RAB14P61106 215 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 PPP2R3AQ06190 1150 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 FSIP1Q8NA03 581 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 TEKT4Q8WW24 435 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 CALR3Q96L12 384 aaKnown RBP3.97□□□□□ -1.77
USP53-205ENST00000509769 SH3GL1Q99961 368 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 GINS4Q9BRT9 223 aa3.97□□□□□ -1.77
USP53-205ENST00000509769 NDEL1Q9GZM8 345 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms