RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CRNKL1Q9BZJ0 848 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 AFG3L2Q9Y4W6 797 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 A0A0G2JLL6 359 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 SDSP20132 328 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 SPP2Q13103 211 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 ERICH6BQ5W0A0 696 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 ZSCAN25Q6NSZ9 544 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 CCDC129Q6ZRS4 1044 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 PRRT2Q7Z6L0 340 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 TTC6Q86TZ1 520 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 ARMT1Q9H993 441 aa10.53□□□□□ -0.72
PDLIM5-213ENST00000509357 ERC2O15083 957 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 MBD4O95243 580 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 GDF11O95390 407 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 FMNL1O95466 1100 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 ASNSP08243 561 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 CYP2C8P10632 490 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 MLLT1Q03111 559 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 RRP1BQ14684 758 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 UBE3CQ15386 1083 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 SHROOM1Q2M3G4 852 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 EPB41L4AQ9HCS5 686 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 TMOD4Q9NZQ9 345 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 PTPN22Q9Y2R2 807 aa10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 COL2A1P02458 1487 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-213ENST00000509357 LAMA4Q16363 1823 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 CYP2D6P10635 497 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 HMGCS2P54868 508 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 LACTBP83111 547 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 NMIQ13287 307 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 PABPC4Q13310 644 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 MOGSQ13724 837 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 GPAT2Q6NUI2 795 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 C17orf99Q6UX52 265 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 DDRGK1Q96HY6 314 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 SERPINB13Q9UIV8 391 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 TACC3Q9Y6A5 838 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 DOCK1Q14185 1865 aa10.51□□□□□ -0.73
PDLIM5-213ENST00000509357 PTPRFP10586 1907 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 GREB1LQ9C091 1923 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 OSBPP22059 807 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 HOXD10P28358 340 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 PSMC4P43686 418 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 JAG1P78504 1218 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 MTMR2Q13614 643 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 NBPF11Q86T75 865 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 PROCA1Q8NCQ7 364 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 APPBP2Q92624 585 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 RILPL2Q969X0 211 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 GINM1Q9NU53 330 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 ZBTB21Q9ULJ3 1066 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 AGTPBP1Q9UPW5 1226 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 SLC45A1Q9Y2W3 748 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 MYH8P13535 1937 aa10.5□□□□□ -0.73
PDLIM5-213ENST00000509357 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 MPHOSPH10O00566 681 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 GNRH1P01148 92 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 GH2P01242 217 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 PLCD1P51178 756 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 FCGRTP55899 365 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 ABCB5Q2M3G0 1257 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 SLC9C1Q4G0N8 1177 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 FEZ1Q99689 392 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 WDR18Q9BV38 432 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 EHD4Q9H223 541 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 PTCH2Q9Y6C5 1203 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 SLC4A4Q9Y6R1 1079 aa10.49□□□□□ -0.73
PDLIM5-213ENST00000509357 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 GPAA1O43292 621 aa10.48□□□□□ -0.73
PDLIM5-213ENST00000509357 MYCP01106 439 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms