RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SNAPC2Q13487 334 aa24.12■■□□□ 1.45
HOXC6-204ENST00000509328 CWC27Q6UX04 472 aaKnown RBP24.12■■□□□ 1.45
HOXC6-204ENST00000509328 TBC1D2Q9BYX2 928 aa24.12■■□□□ 1.45
HOXC6-204ENST00000509328 KCNH4Q9UQ05 1017 aa24.12■■□□□ 1.45
HOXC6-204ENST00000509328 CCDC171Q6TFL3 1326 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 GDF11O95390 407 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 CETPP11597 493 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 CERKLQ49MI3 558 aaPredicted RBP24.11■■□□□ 1.45
HOXC6-204ENST00000509328 SKAP1Q86WV1 359 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 DYNLL2Q96FJ2 89 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 NAPBQ9H115 298 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 SAGE1Q9NXZ1 904 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.11■■□□□ 1.45
HOXC6-204ENST00000509328 AFG3L2Q9Y4W6 797 aa24.11■■□□□ 1.45
HOXC6-204ENST00000509328 CCL15-CCL14A0A0B4J2E2 113 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 USP17L5A8MUK1 530 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 MINDY4BA8MYZ0 360 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 CXCL11O14625 94 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 FOXN1O15353 648 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 FOXP2O15409 715 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 CCL15Q16663 113 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 C16orf86Q6ZW13 317 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 ZNF589Q86UQ0 364 aaPredicted RBP24.1■■□□□ 1.45
HOXC6-204ENST00000509328 IFNL1Q8IU54 200 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 RNF186Q9NXI6 227 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 ZBTB21Q9ULJ3 1066 aa24.1■■□□□ 1.45
HOXC6-204ENST00000509328 ROBO3Q96MS0 1386 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 SMIM22K7EJ46 135 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 JAG1P78504 1218 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 ABCB5Q2M3G0 1257 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 VPS53Q5VIR6 699 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 OTUD7BQ6GQQ9 843 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 SLC44A5Q8NCS7 719 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 BRI3BPQ8WY22 251 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 AS3MTQ9HBK9 375 aa24.09■■□□□ 1.45
HOXC6-204ENST00000509328 TRPA1O75762 1119 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 ALDH1A1P00352 501 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 GH2P01242 217 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 CDK8P49336 464 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 ALX1Q15699 326 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 CCDC84Q86UT8 332 aaPredicted RBP24.08■■□□□ 1.45
HOXC6-204ENST00000509328 CABP5Q9NP86 173 aa24.08■■□□□ 1.45
HOXC6-204ENST00000509328 IGF2BP3O00425 579 aaKnown RBP eCLIP24.07■■□□□ 1.44
HOXC6-204ENST00000509328 HSPD1P10809 573 aaKnown RBP24.07■■□□□ 1.44
HOXC6-204ENST00000509328 CTCFP49711 727 aaPredicted RBP24.07■■□□□ 1.44
HOXC6-204ENST00000509328 SHROOM1Q2M3G4 852 aaPredicted RBP24.07■■□□□ 1.44
HOXC6-204ENST00000509328 ZNF280CQ8ND82 737 aa24.07■■□□□ 1.44
HOXC6-204ENST00000509328 PTPN18Q99952 460 aa24.07■■□□□ 1.44
HOXC6-204ENST00000509328 TRIM75PA6NK02 468 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 CHMLP26374 656 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 BMP2KLQ5H9B9 411 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 RUFY2Q8WXA3 655 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 CCDC17Q96LX7 622 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 WDR18Q9BV38 432 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 RAD50Q92878 1312 aa24.06■■□□□ 1.44
HOXC6-204ENST00000509328 A0A0G2JLL6 359 aaPredicted RBP24.05■■□□□ 1.44
HOXC6-204ENST00000509328 SPP2Q13103 211 aa24.05■■□□□ 1.44
HOXC6-204ENST00000509328 PRRT2Q7Z6L0 340 aaPredicted RBP24.05■■□□□ 1.44
HOXC6-204ENST00000509328 LOC285556D6RIA3 1793 aa24.05■■□□□ 1.44
HOXC6-204ENST00000509328 ZMYM6O95789 1325 aa24.05■■□□□ 1.44
HOXC6-204ENST00000509328 SLC3A2P08195 630 aaKnown RBP24.04■■□□□ 1.44
HOXC6-204ENST00000509328 HSPA8P11142 646 aaKnown RBP24.04■■□□□ 1.44
HOXC6-204ENST00000509328 PPARAQ07869 468 aa24.04■■□□□ 1.44
HOXC6-204ENST00000509328 CFHR5Q9BXR6 569 aa24.04■■□□□ 1.44
HOXC6-204ENST00000509328 ZNF287Q9HBT7 754 aa24.04■■□□□ 1.44
HOXC6-204ENST00000509328 ZCCHC17Q9NP64 241 aaKnown RBP24.04■■□□□ 1.44
HOXC6-204ENST00000509328 BTBD19C9JJ37 291 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 MPHOSPH10O00566 681 aaKnown RBP24.03■■□□□ 1.44
HOXC6-204ENST00000509328 FGAP02671 866 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 MOGSQ13724 837 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 RAB3GAP1Q15042 981 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 TMEM179Q6ZVK1 233 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 FASTKD5Q7L8L6 764 aaKnown RBP24.03■■□□□ 1.44
HOXC6-204ENST00000509328 MKNK2Q9HBH9 465 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 TSKSQ9UJT2 592 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 LAMA4Q16363 1823 aa24.03■■□□□ 1.44
HOXC6-204ENST00000509328 GREB1LQ9C091 1923 aaPredicted RBP24.02■■□□□ 1.44
HOXC6-204ENST00000509328 AKR1B1P15121 316 aa24.02■■□□□ 1.44
HOXC6-204ENST00000509328 GUCY1A2P33402 732 aa24.02■■□□□ 1.44
HOXC6-204ENST00000509328 ANKRD23Q86SG2 305 aa24.02■■□□□ 1.44
HOXC6-204ENST00000509328 STK11IPQ8N1F8 1099 aa24.02■■□□□ 1.44
HOXC6-204ENST00000509328 FAM43AQ8N2R8 423 aa24.02■■□□□ 1.44
HOXC6-204ENST00000509328 LBX1P52954 281 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 PDE4BQ07343 736 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 SEPT2Q15019 361 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 GADL1Q6ZQY3 521 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 DSCC1Q9BVC3 393 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 IL25Q9H293 177 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 ANAPC4Q9UJX5 808 aa24.01■■□□□ 1.43
HOXC6-204ENST00000509328 C19orf81C9J6K1 198 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 USP17L10C9JJH3 530 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 TBC1D8O95759 1140 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 RASA1P20936 1047 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 BACE1P56817 501 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 MTMR2Q13614 643 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 SH3D19Q5HYK7 790 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 PROCA1Q8NCQ7 364 aaPredicted RBP24■■□□□ 1.43
HOXC6-204ENST00000509328 CASP8AP2Q9UKL3 1982 aa24■■□□□ 1.43
HOXC6-204ENST00000509328 HMGCS2P54868 508 aa23.99■■□□□ 1.43
HOXC6-204ENST00000509328 CTDSPL2Q05D32 466 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms