RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 PI4KBQ9UBF8 816 aa19.69■□□□□ 0.74
CXCL1-202ENST00000509101 GDF11O95390 407 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 ASNSP08243 561 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 JAG1P78504 1218 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 GPR153Q6NV75 609 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 MAPKAPK5Q8IW41 473 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
CXCL1-202ENST00000509101 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
CXCL1-202ENST00000509101 UQCRFS1P1P0C7P4 283 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 ZKSCAN1P17029 563 aaPredicted RBP19.67■□□□□ 0.74
CXCL1-202ENST00000509101 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
CXCL1-202ENST00000509101 PDE3AQ14432 1141 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 LRIT3Q3SXY7 679 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 NAA16Q6N069 864 aaPredicted RBP19.67■□□□□ 0.74
CXCL1-202ENST00000509101 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
CXCL1-202ENST00000509101 GPRC5AQ8NFJ5 357 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 TGFBRAP1Q8WUH2 860 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 PAGR1Q9BTK6 254 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 SNRKQ9NRH2 765 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 FLT1P17948 1338 aa19.67■□□□□ 0.74
CXCL1-202ENST00000509101 USP17L10C9JJH3 530 aa19.66■□□□□ 0.74
CXCL1-202ENST00000509101 RARSP54136 660 aaKnown RBP19.66■□□□□ 0.74
CXCL1-202ENST00000509101 CACNB2Q08289 660 aaPredicted RBP19.66■□□□□ 0.74
CXCL1-202ENST00000509101 UBE2OQ9C0C9 1292 aaKnown RBP19.66■□□□□ 0.74
CXCL1-202ENST00000509101 PORCNQ9H237 461 aa19.66■□□□□ 0.74
CXCL1-202ENST00000509101 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 BAG3O95817 575 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 XRCC5P13010 732 aaKnown RBP19.65■□□□□ 0.74
CXCL1-202ENST00000509101 PLCG2P16885 1265 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 CCND3P30281 292 aaPredicted RBP19.65■□□□□ 0.74
CXCL1-202ENST00000509101 MAPK4P31152 587 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 ERVK-9P63128 1117 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 ERVK-24P63145 666 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 G3BP1Q13283 466 aaKnown RBP eCLIP19.65■□□□□ 0.74
CXCL1-202ENST00000509101 CCL14Q16627 93 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 ADGRA1Q86SQ6 560 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 CCAR1Q8IX12 1150 aaKnown RBP19.65■□□□□ 0.74
CXCL1-202ENST00000509101 RBPJLQ9UBG7 517 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 ZBTB21Q9ULJ3 1066 aa19.65■□□□□ 0.74
CXCL1-202ENST00000509101 UNC80Q8N2C7 3258 aa19.64■□□□□ 0.74
CXCL1-202ENST00000509101 DNAH12Q6ZR08 3092 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 C19orf81C9J6K1 198 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 RGS2P41220 211 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 TTC39AQ5SRH9 613 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 GPR142Q7Z601 462 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 TRMT44Q8IYL2 757 aaKnown RBP19.64■□□□□ 0.73
CXCL1-202ENST00000509101 ARHGAP45Q92619 1136 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
CXCL1-202ENST00000509101 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
CXCL1-202ENST00000509101 GNAI2P04899 355 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 COL6A1P12109 1028 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 LRRC26Q2I0M4 334 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 Q3C1V9 767 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 PLEKHH3Q7Z736 793 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 USP6NLQ92738 828 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 APBA2Q99767 749 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
CXCL1-202ENST00000509101 TNNQ9UQP3 1299 aa19.63■□□□□ 0.73
CXCL1-202ENST00000509101 MORN1Q5T089 497 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 METTL16Q86W50 562 aaKnown RBP19.62■□□□□ 0.73
CXCL1-202ENST00000509101 GTF3C2Q8WUA4 911 aaPredicted RBP19.62■□□□□ 0.73
CXCL1-202ENST00000509101 DBNDD2Q9BQY9 259 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 GINM1Q9NU53 330 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 MTMR10Q9NXD2 777 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 STXBP5LQ9Y2K9 1186 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 LTBP2Q14767 1821 aa19.62■□□□□ 0.73
CXCL1-202ENST00000509101 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 HLA-DOAP06340 250 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 PPP4CP60510 307 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 MDM2Q00987 491 aaPredicted RBP19.61■□□□□ 0.73
CXCL1-202ENST00000509101 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
CXCL1-202ENST00000509101 LHX8Q68G74 356 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
CXCL1-202ENST00000509101 EMILIN3Q9NT22 766 aa19.61■□□□□ 0.73
CXCL1-202ENST00000509101 LAMA2P24043 3122 aaKnown RBP19.6■□□□□ 0.73
CXCL1-202ENST00000509101 CYP2E1P05181 493 aaPredicted RBP19.6■□□□□ 0.73
CXCL1-202ENST00000509101 TRIM27P14373 513 aa19.6■□□□□ 0.73
CXCL1-202ENST00000509101 DYNLL1P63167 89 aaKnown RBP19.6■□□□□ 0.73
CXCL1-202ENST00000509101 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
CXCL1-202ENST00000509101 USP17L2Q6R6M4 530 aa19.6■□□□□ 0.73
CXCL1-202ENST00000509101 FEZ1Q99689 392 aa19.6■□□□□ 0.73
CXCL1-202ENST00000509101 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
CXCL1-202ENST00000509101 GH2P01242 217 aa19.59■□□□□ 0.73
CXCL1-202ENST00000509101 CCDC158Q5M9N0 1113 aa19.59■□□□□ 0.73
CXCL1-202ENST00000509101 NDUFB9Q9Y6M9 179 aa19.59■□□□□ 0.73
CXCL1-202ENST00000509101 ZAP70P43403 619 aa19.58■□□□□ 0.72
CXCL1-202ENST00000509101 MAP2K5Q13163 448 aa19.58■□□□□ 0.72
CXCL1-202ENST00000509101 OS9Q13438 667 aaPredicted RBP19.58■□□□□ 0.72
CXCL1-202ENST00000509101 WDR78Q5VTH9 848 aa19.58■□□□□ 0.72
CXCL1-202ENST00000509101 ATF7IPQ6VMQ6 1270 aa19.58■□□□□ 0.72
CXCL1-202ENST00000509101 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.72
CXCL1-202ENST00000509101 GPR108Q9NPR9 543 aa19.58■□□□□ 0.72
CXCL1-202ENST00000509101 PIH1D3Q9NQM4 214 aaKnown RBP19.58■□□□□ 0.72
CXCL1-202ENST00000509101 CNMDO75829 334 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 C12orf42Q96LP6 360 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 FLRT1Q9NZU1 646 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 RABGAP1Q9Y3P9 1069 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms