RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MAPK8IP1Q9UQF2 711 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 CORINQ9Y5Q5 1042 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 COL17A1Q9UMD9 1497 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 MINDY4BA8MYZ0 360 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 NKPD1Q17RQ9 610 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 LETMD1Q6P1Q0 360 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 ACSF2Q96CM8 615 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 TMEM87BQ96K49 555 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 DPH2Q9BQC3 489 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 VAV3Q9UKW4 847 aa9.3□□□□□ -0.92
TOPBP1-206ENST00000508524 TMEM265A0A087WTH1 108 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 CD96P40200 585 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 PRKCQQ04759 706 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 PDE4BQ07343 736 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 GOLM1Q8NBJ4 401 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 AGBL5Q8NDL9 886 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 ADAM30Q9UKF2 790 aa9.29□□□□□ -0.92
TOPBP1-206ENST00000508524 BPNT1O95861 308 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 SNAP47Q5SQN1 464 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 SLC6A19Q695T7 634 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 CBLL1Q75N03 491 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 MCATQ8IVS2 390 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 HRASLS5Q96KN8 279 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 KCNQ5Q9NR82 932 aa9.28□□□□□ -0.92
TOPBP1-206ENST00000508524 PRR33A8MZF0 331 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 CD8BP10966 210 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 AOC3Q16853 763 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 DIEXFQ68CQ4 756 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 C22orf34Q6ZV56 151 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 FBXO27Q8NI29 283 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 KRTAP4-8Q9BYQ9 185 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 TPX2Q9ULW0 747 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 POLR3KQ9Y2Y1 108 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 SNX11Q9Y5W9 270 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
TOPBP1-206ENST00000508524 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 ZNF865P0CJ78 1059 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 PLCG1P19174 1290 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 MPP2Q14168 576 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 TMEM201Q5SNT2 666 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 BCL11AQ9H165 835 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
TOPBP1-206ENST00000508524 RBM47A0AV96 593 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-206ENST00000508524 TAL1P17542 331 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-206ENST00000508524 SFRP5Q5T4F7 317 aa9.25□□□□□ -0.93
TOPBP1-206ENST00000508524 HS2ST1Q7LGA3 356 aa9.25□□□□□ -0.93
TOPBP1-206ENST00000508524 REC114Q7Z4M0 266 aa9.25□□□□□ -0.93
TOPBP1-206ENST00000508524 FUT4P22083 530 aa9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 EIF4A3P38919 411 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 CLCN7P51798 805 aa9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 ZNF746Q6NUN9 644 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
TOPBP1-206ENST00000508524 UPK3BL1B0FP48 263 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 UPK3BL2E5RIL1 263 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 GRIN3BO60391 1043 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 GREM1O60565 184 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 PLCL1Q15111 1095 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 MFSD4AQ8N468 514 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 TMEM87AQ8NBN3 555 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 LRRC3Q9BY71 257 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 REV1Q9UBZ9 1251 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 CAPN6Q9Y6Q1 641 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 PITPNM2Q9BZ72 1349 aa9.23□□□□□ -0.93
TOPBP1-206ENST00000508524 TLR3O15455 904 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 HTR3BO95264 441 aa9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 FAM13CQ8NE31 585 aa9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 PPP1R13LQ8WUF5 828 aa9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 ADAMTS1Q9UHI8 967 aa9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-206ENST00000508524 DNAJA2O60884 412 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 CRKP46108 304 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ZNF792Q3KQV3 632 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 CYB5D2Q8WUJ1 264 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ASB11Q8WXH4 323 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ADAMTS6Q9UKP5 1117 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ST14Q9Y5Y6 855 aa9.21□□□□□ -0.94
TOPBP1-206ENST00000508524 ANGEL2Q5VTE6 544 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-206ENST00000508524 SLFN12Q8IYM2 578 aa9.2□□□□□ -0.94
TOPBP1-206ENST00000508524 COX4I2Q96KJ9 171 aa9.2□□□□□ -0.94
TOPBP1-206ENST00000508524 SEMA3GQ9NS98 782 aa9.2□□□□□ -0.94
TOPBP1-206ENST00000508524 ROBO2Q9HCK4 1378 aa9.2□□□□□ -0.94
TOPBP1-206ENST00000508524 FAM155AB1AL88 458 aaPredicted RBP9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 CBX7O95931 251 aa9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 CYP7A1P22680 504 aa9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 ETV3P41162 512 aa9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 CWF19L2Q2TBE0 894 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 HSPA12BQ96MM6 686 aa9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 MBNL3Q9NUK0 354 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-206ENST00000508524 CEP131Q9UPN4 1083 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms