RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 SBNO2Q9Y2G9 1366 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.75□□□□□ -1.97
SMN2-208ENST00000508258 PAX4O43316 350 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 RNGTTO60942 597 aaKnown RBP2.75□□□□□ -1.97
SMN2-208ENST00000508258 ADAMTS4O75173 837 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SLFN14P0C7P3 912 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 FOSL1P15407 271 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 LIG1P18858 919 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ARNTP27540 789 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ADMP35318 185 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 GIPRP48546 466 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 CYP27A1Q02318 531 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 LRRC14Q15048 493 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 TCEAL1Q15170 157 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SEZ6Q53EL9 994 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ARHGAP27Q6ZUM4 889 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 REC114Q7Z4M0 266 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ZAR1Q86SH2 424 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SHISA5Q8N114 240 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 FAM169BQ8N8A8 192 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 RBBP8NLQ8NC74 664 aaPredicted RBP2.75□□□□□ -1.97
SMN2-208ENST00000508258 GRIN3AQ8TCU5 1115 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ACSBG1Q96GR2 724 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 KRTAP4-8Q9BYQ9 185 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 NRSN2Q9GZP1 204 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 MIR1-1HGQ9H1L0 117 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SEMA6CQ9H3T2 930 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 EHMT1Q9H9B1 1298 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 CBX8Q9HC52 389 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SSU72Q9NP77 194 aaKnown RBP2.75□□□□□ -1.97
SMN2-208ENST00000508258 PICK1Q9NRD5 415 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 PPT2Q9UMR5 302 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 MSRB2Q9Y3D2 182 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 SAMM50Q9Y512 469 aa2.75□□□□□ -1.97
SMN2-208ENST00000508258 ANKRD62A6NC57 917 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 SMAD7O15105 426 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 TLR3O15455 904 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 TRIM37O94972 964 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 ATE1O95260 518 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 GSTP1P09211 210 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 TAL1P17542 331 aaPredicted RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 NCLP19338 710 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 SPINK2P20155 84 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 HSD3B2P26439 372 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 ZNF165P49910 485 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 EIF6P56537 245 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 ID3Q02535 119 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CLCQ05315 142 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 PTPN11Q06124 597 aaPredicted RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 CDK5R2Q13319 367 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 SEPT6Q14141 434 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 RASA3Q14644 834 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CPSF6Q16630 551 aaKnown RBP eCLIP2.74□□□□□ -1.97
SMN2-208ENST00000508258 CWF19L2Q2TBE0 894 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 TNNI3KQ59H18 835 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 MAP1SQ66K74 1059 aaPredicted RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 LLGL2Q6P1M3 1020 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CCDC81Q6ZN84 652 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 ZNF765Q7L2R6 523 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 SULF2Q8IWU5 870 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 FLCNQ8NFG4 579 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CPLX3Q8WVH0 158 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 HNRNPLLQ8WVV9 542 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 JARID2Q92833 1246 aaPredicted RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 ANAPC16Q96DE5 110 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 WDR89Q96FK6 387 aaPredicted RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 MRFAP1L1Q96HT8 127 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 RNPC3Q96LT9 517 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 WDR18Q9BV38 432 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 EMILIN2Q9BXX0 1053 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CCDC113Q9H0I3 377 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 ATXN3LQ9H3M9 355 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 CCDC86Q9H6F5 360 aaKnown RBP2.74□□□□□ -1.97
SMN2-208ENST00000508258 BRMS1Q9HCU9 246 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 PPP1R9AQ9ULJ8 1098 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 ZNRF3Q9ULT6 936 aa2.74□□□□□ -1.97
SMN2-208ENST00000508258 PRR36Q9H6K5 1346 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 COL17A1Q9UMD9 1497 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 FAM221BA6H8Z2 402 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 GFRA2O00451 464 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 ENPP3O14638 875 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 TMPRSS2O15393 492 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 DYNC1LI2O43237 492 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 IMPDH2P12268 514 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 HCLS1P14317 486 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 LMNB1P20700 586 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 CASP7P55210 303 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 RPL6Q02878 288 aaKnown RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 CYP27C1Q4G0S4 372 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 MPRIPQ6WCQ1 1025 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 VSIG10LQ86VR7 867 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 ABI1Q8IZP0 508 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 CELF2-AS1Q8N7Q2 184 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 OR6P1Q8NGX9 317 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 EZH1Q92800 747 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 FBXL18Q96ME1 805 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 DEPDC7Q96QD5 511 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 SRPK1Q96SB4 655 aaKnown RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 TRIM55Q9BYV6 548 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 ACSS3Q9H6R3 686 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms