RNA–Protein interactions for RNA: ENST00000507604.1

CLUHP4-201, Transcript of clustered mitochondria homolog pseudogene 4, humanhuman

BASIC

Gene CLUHP4, Length 1,343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP4-201ENST00000507604 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
CLUHP4-201ENST00000507604 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
CLUHP4-201ENST00000507604 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
CLUHP4-201ENST00000507604 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
CLUHP4-201ENST00000507604 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
CLUHP4-201ENST00000507604 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 MTMR2Q13614 643 aa12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 SH3BP5LQ7L8J4 393 aa12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 PRDM5Q9NQX1 630 aaPredicted RBP12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 RABGAP1Q9Y3P9 1069 aa12.67□□□□□ -0.38
CLUHP4-201ENST00000507604 HLA-DOAP06340 250 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 USP14P54578 494 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 RTP1P59025 263 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 SIL1Q9H173 461 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 TACC3Q9Y6A5 838 aa12.66□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L15C9J2P7 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L13C9JLJ4 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L11C9JVI0 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L18D6R9N7 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L22D6RA61 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L17D6RBQ6 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L19D6RCP7 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L20D6RJB6 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 STRNO43815 780 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 PHKA1P46020 1223 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 MECOMQ03112 1051 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP17L24Q0WX57 530 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 SHHQ15465 462 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 MORN1Q5T089 497 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 DPP9Q86TI2 863 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 FEZ1Q99689 392 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
CLUHP4-201ENST00000507604 IGSF3O75054 1194 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 USP6NLQ92738 828 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 RBPJLQ9UBG7 517 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 COL6A3P12111 3177 aa12.64□□□□□ -0.39
CLUHP4-201ENST00000507604 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
CLUHP4-201ENST00000507604 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
CLUHP4-201ENST00000507604 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
CLUHP4-201ENST00000507604 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
CLUHP4-201ENST00000507604 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
CLUHP4-201ENST00000507604 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 RAG1P15918 1043 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 PTPREP23469 700 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 RHBDL3P58872 404 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 CCL14Q16627 93 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 BADQ92934 168 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 HOXC6P09630 235 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 UQCRFS1P1P0C7P4 283 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 RFX5P48382 616 aaPredicted RBP12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 TIMM10P62072 90 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 Q3C1V9 767 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 PORCNQ9H237 461 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
CLUHP4-201ENST00000507604 DCDC2CA8MYV0 355 aa12.61□□□□□ -0.39
CLUHP4-201ENST00000507604 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
CLUHP4-201ENST00000507604 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
CLUHP4-201ENST00000507604 RNF180Q86T96 592 aa12.61□□□□□ -0.39
CLUHP4-201ENST00000507604 RFX7Q2KHR2 1363 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 SEPT4O43236 478 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 PLA2G5P39877 138 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 FPGSQ05932 587 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 DOCK1Q14185 1865 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 OLFML2BQ68BL8 750 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
CLUHP4-201ENST00000507604 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms