RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 SPP2Q13103 211 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 HDAC1Q13547 482 aaPredicted RBP9.21□□□□□ -0.94
SFXN1-206ENST00000507017 FAM110CQ1W6H9 321 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.94
SFXN1-206ENST00000507017 SH3D19Q5HYK7 790 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 GIMAP6Q6P9H5 292 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 C17orf99Q6UX52 265 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 KBTBD3Q8NAB2 608 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 RAET1EQ8TD07 263 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 COA7Q96BR5 231 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 CCDC17Q96LX7 622 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 RIOK1Q9BRS2 568 aaKnown RBP9.21□□□□□ -0.94
SFXN1-206ENST00000507017 NACAP1Q9BZK3 213 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 ARPP21Q9UBL0 812 aaPredicted RBP9.21□□□□□ -0.94
SFXN1-206ENST00000507017 SAP30BPQ9UHR5 308 aaKnown RBP9.21□□□□□ -0.94
SFXN1-206ENST00000507017 ZBTB21Q9ULJ3 1066 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 CDK5RAP2Q96SN8 1893 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 MYH7P12883 1935 aa9.21□□□□□ -0.94
SFXN1-206ENST00000507017 LOC285556D6RIA3 1793 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 MBD4O95243 580 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 SLC3A2P08195 630 aaKnown RBP9.2□□□□□ -0.94
SFXN1-206ENST00000507017 MX1P20591 662 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 PSMC4P43686 418 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 UBXN2AP68543 259 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 ABCB5Q2M3G0 1257 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 CCAR1Q8IX12 1150 aaKnown RBP9.2□□□□□ -0.94
SFXN1-206ENST00000507017 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 APPBP2Q92624 585 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 ARMC5Q96C12 935 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 TRIM47Q96LD4 638 aa9.2□□□□□ -0.94
SFXN1-206ENST00000507017 PTPRFP10586 1907 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 TNPO2O14787 897 aaKnown RBP9.19□□□□□ -0.94
SFXN1-206ENST00000507017 BCRP11274 1271 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 HMGCS2P54868 508 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 CCNA1P78396 465 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 MTMR2Q13614 643 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 GPAT2Q6NUI2 795 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 TMEM179Q6ZVK1 233 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 SLAIN1Q8ND83 568 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 FSD1Q9BTV5 496 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 R3HDMLQ9H3Y0 253 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 CWC22Q9HCG8 908 aaKnown RBP9.19□□□□□ -0.94
SFXN1-206ENST00000507017 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
SFXN1-206ENST00000507017 SRRDQ9UH36 339 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 CPA4Q9UI42 421 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 SLC4A4Q9Y6R1 1079 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 MYPNQ86TC9 1320 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 ADGRA2Q96PE1 1338 aa9.19□□□□□ -0.94
SFXN1-206ENST00000507017 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
SFXN1-206ENST00000507017 TCRBV5S4A2TA0A5A2 114 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 MPHOSPH10O00566 681 aaKnown RBP9.18□□□□□ -0.94
SFXN1-206ENST00000507017 RNF113AO15541 343 aaKnown RBP9.18□□□□□ -0.94
SFXN1-206ENST00000507017 GDF11O95390 407 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 GH2P01242 217 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 HOXA7P31268 230 aaPredicted RBP9.18□□□□□ -0.94
SFXN1-206ENST00000507017 MOGSQ13724 837 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 RAB3GAP1Q15042 981 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 DDX60LQ5H9U9 1706 aaKnown RBP9.18□□□□□ -0.94
SFXN1-206ENST00000507017 TRMT44Q8IYL2 757 aaKnown RBP9.18□□□□□ -0.94
SFXN1-206ENST00000507017 LCORLQ8N3X6 602 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 PHIPQ8WWQ0 1821 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 CRBNQ96SW2 442 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 ARMT1Q9H993 441 aa9.18□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-206ENST00000507017 CYP2C8P10632 490 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 MAPK4P31152 587 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 GRK4P32298 578 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 TDO2P48775 406 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 SLC4A8Q2Y0W8 1093 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 ANKRD45Q5TZF3 282 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 SOCS4Q8WXH5 440 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 LPAR1Q92633 364 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 EVI5LQ96CN4 794 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 DNAJC18Q9H819 358 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 BIN2Q9UBW5 565 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-206ENST00000507017 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 PTCH2Q9Y6C5 1203 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 MYH8P13535 1937 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
SFXN1-206ENST00000507017 RBBP6Q7Z6E9 1792 aaKnown RBP9.17□□□□□ -0.94
SFXN1-206ENST00000507017 SOX10P56693 466 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms