RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 HERC5Q9UII4 1024 aaKnown RBP16.46■□□□□ 0.23
DDX41-206ENST00000506965 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
DDX41-206ENST00000506965 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
DDX41-206ENST00000506965 UQCRFS1P1P0C7P4 283 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 BACE1P56817 501 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 Q3C1V9 767 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 COA7Q96BR5 231 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
DDX41-206ENST00000506965 LRCH3Q96II8 777 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 PORCNQ9H237 461 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 PI4KBQ9UBF8 816 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 RBPJLQ9UBG7 517 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
DDX41-206ENST00000506965 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
DDX41-206ENST00000506965 HMGCRP04035 888 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
DDX41-206ENST00000506965 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
DDX41-206ENST00000506965 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 USP6NLQ92738 828 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 STAP2Q9UGK3 403 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 ZBTB21Q9ULJ3 1066 aa16.44■□□□□ 0.22
DDX41-206ENST00000506965 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
DDX41-206ENST00000506965 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 CNMDO75829 334 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 CCL14Q16627 93 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
DDX41-206ENST00000506965 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
DDX41-206ENST00000506965 MYH8P13535 1937 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
DDX41-206ENST00000506965 PFASO15067 1338 aa16.43■□□□□ 0.22
DDX41-206ENST00000506965 IPO8O15397 1037 aaKnown RBP16.42■□□□□ 0.22
DDX41-206ENST00000506965 HERVK_113P62684 666 aa16.42■□□□□ 0.22
DDX41-206ENST00000506965 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
DDX41-206ENST00000506965 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
DDX41-206ENST00000506965 DHX36Q9H2U1 1008 aaKnown RBP16.42■□□□□ 0.22
DDX41-206ENST00000506965 A0A0C4DFX4 3053 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 EVI5O60447 810 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
DDX41-206ENST00000506965 ASNSP08243 561 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 CYP2B6P20813 491 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 GDF15Q99988 308 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 NR2E3Q9Y5X4 410 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 RPTORQ8N122 1335 aa16.41■□□□□ 0.22
DDX41-206ENST00000506965 CYP7A1P22680 504 aa16.4■□□□□ 0.22
DDX41-206ENST00000506965 MORN1Q5T089 497 aa16.4■□□□□ 0.22
DDX41-206ENST00000506965 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
DDX41-206ENST00000506965 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
DDX41-206ENST00000506965 OGDHLQ9ULD0 1010 aa16.4■□□□□ 0.22
DDX41-206ENST00000506965 ZMYND8Q9ULU4 1186 aaPredicted RBP16.4■□□□□ 0.22
DDX41-206ENST00000506965 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
DDX41-206ENST00000506965 ZNFX1Q9P2E3 1918 aaKnown RBP16.39■□□□□ 0.21
DDX41-206ENST00000506965 USP17L10C9JJH3 530 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 BAG3O95817 575 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 GH2P01242 217 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 CCND3P30281 292 aaPredicted RBP16.39■□□□□ 0.21
DDX41-206ENST00000506965 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 ERVK-9P63128 1117 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 ERVK-24P63145 666 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
DDX41-206ENST00000506965 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 LHX8Q68G74 356 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 C7orf61Q8IZ16 206 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 ACER1Q8TDN7 264 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 FLRT1Q9NZU1 646 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 LTBP2Q14767 1821 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 MYH7P12883 1935 aa16.39■□□□□ 0.21
DDX41-206ENST00000506965 EYSQ5T1H1 3165 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 COL6A1P12109 1028 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
DDX41-206ENST00000506965 SYN1P17600 705 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 PLCD1P51178 756 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
DDX41-206ENST00000506965 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX41-206ENST00000506965 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 RIOK1Q9BRS2 568 aaKnown RBP16.38■□□□□ 0.21
DDX41-206ENST00000506965 HMX1Q9NP08 348 aaPredicted RBP16.38■□□□□ 0.21
DDX41-206ENST00000506965 UNC80Q8N2C7 3258 aa16.38■□□□□ 0.21
DDX41-206ENST00000506965 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 IDH1O75874 414 aaKnown RBP16.37■□□□□ 0.21
DDX41-206ENST00000506965 PLCG2P16885 1265 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 SHMT1P34896 483 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 ZYXQ15942 572 aaKnown RBP16.37■□□□□ 0.21
DDX41-206ENST00000506965 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
DDX41-206ENST00000506965 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 GPRC5AQ8NFJ5 357 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 C12orf42Q96LP6 360 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 TMOD4Q9NZQ9 345 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
DDX41-206ENST00000506965 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms