RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ROBO3Q96MS0 1386 aa21.75■■□□□ 1.07
NPHP4-210ENST00000506941 HIP1O00291 1037 aa21.75■■□□□ 1.07
NPHP4-210ENST00000506941 TDO2P48775 406 aa21.75■■□□□ 1.07
NPHP4-210ENST00000506941 IL25Q9H293 177 aa21.75■■□□□ 1.07
NPHP4-210ENST00000506941 ZHX2Q9Y6X8 837 aa21.75■■□□□ 1.07
NPHP4-210ENST00000506941 CASP8AP2Q9UKL3 1982 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 FOXN1O15353 648 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 SREBF2Q12772 1141 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 AMOTL1Q8IY63 956 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 REM2Q8IYK8 340 aaPredicted RBP21.74■■□□□ 1.07
NPHP4-210ENST00000506941 ZBTB21Q9ULJ3 1066 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 KCNH4Q9UQ05 1017 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 AFG3L2Q9Y4W6 797 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 MYH4Q9Y623 1939 aa21.74■■□□□ 1.07
NPHP4-210ENST00000506941 TESPA1A2RU30 521 aaPredicted RBP21.73■■□□□ 1.07
NPHP4-210ENST00000506941 IGF2BP3O00425 579 aaKnown RBP eCLIP21.73■■□□□ 1.07
NPHP4-210ENST00000506941 GTF2A2P52657 109 aa21.73■■□□□ 1.07
NPHP4-210ENST00000506941 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
NPHP4-210ENST00000506941 C16orf86Q6ZW13 317 aa21.73■■□□□ 1.07
NPHP4-210ENST00000506941 BRI3BPQ8WY22 251 aa21.73■■□□□ 1.07
NPHP4-210ENST00000506941 PTPN18Q99952 460 aa21.73■■□□□ 1.07
NPHP4-210ENST00000506941 NACAP1Q9BZK3 213 aa21.73■■□□□ 1.07
NPHP4-210ENST00000506941 CCL15-CCL14A0A0B4J2E2 113 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 MINDY4BA8MYZ0 360 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 GH2P01242 217 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 ASNSP08243 561 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 HSPD1P10809 573 aaKnown RBP21.72■■□□□ 1.07
NPHP4-210ENST00000506941 CHMLP26374 656 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 CDK8P49336 464 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 SNAPC2Q13487 334 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 CCL15Q16663 113 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 IFNL1Q8IU54 200 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 NAPBQ9H115 298 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 RNF186Q9NXI6 227 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 SWAP70Q9UH65 585 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 TSKSQ9UJT2 592 aa21.72■■□□□ 1.07
NPHP4-210ENST00000506941 INHBEP58166 350 aa21.71■■□□□ 1.07
NPHP4-210ENST00000506941 MOGSQ13724 837 aa21.71■■□□□ 1.07
NPHP4-210ENST00000506941 BEGAINQ9BUH8 593 aa21.71■■□□□ 1.07
NPHP4-210ENST00000506941 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
NPHP4-210ENST00000506941 TRIM75PA6NK02 468 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 USP17L5A8MUK1 530 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 TRPA1O75762 1119 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 ALX1Q15699 326 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 ABCB5Q2M3G0 1257 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 BMP2KLQ5H9B9 411 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 STK11IPQ8N1F8 1099 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 GINM1Q9NU53 330 aa21.7■■□□□ 1.06
NPHP4-210ENST00000506941 A0A0G2JLL6 359 aaPredicted RBP21.69■■□□□ 1.06
NPHP4-210ENST00000506941 CXCL11O14625 94 aa21.69■■□□□ 1.06
NPHP4-210ENST00000506941 CETPP11597 493 aa21.69■■□□□ 1.06
NPHP4-210ENST00000506941 GUCY1A2P33402 732 aa21.69■■□□□ 1.06
NPHP4-210ENST00000506941 MFAP1P55081 439 aaKnown RBP21.69■■□□□ 1.06
NPHP4-210ENST00000506941 PRRT2Q7Z6L0 340 aaPredicted RBP21.69■■□□□ 1.06
NPHP4-210ENST00000506941 SAGE1Q9NXZ1 904 aa21.69■■□□□ 1.06
NPHP4-210ENST00000506941 ZMYM6O95789 1325 aa21.69■■□□□ 1.06
NPHP4-210ENST00000506941 CA12O43570 354 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 FGAP02671 866 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 HSPA8P11142 646 aaKnown RBP21.68■■□□□ 1.06
NPHP4-210ENST00000506941 AKR1B1P15121 316 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 PPARAQ07869 468 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 SPP2Q13103 211 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 ZNF280CQ8ND82 737 aa21.68■■□□□ 1.06
NPHP4-210ENST00000506941 RAD50Q92878 1312 aa21.67■■□□□ 1.06
NPHP4-210ENST00000506941 BTBD19C9JJ37 291 aa21.67■■□□□ 1.06
NPHP4-210ENST00000506941 WDR18Q9BV38 432 aa21.67■■□□□ 1.06
NPHP4-210ENST00000506941 TBC1D2Q9BYX2 928 aa21.67■■□□□ 1.06
NPHP4-210ENST00000506941 MPHOSPH10O00566 681 aaKnown RBP21.66■■□□□ 1.06
NPHP4-210ENST00000506941 RASA1P20936 1047 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 CTDSPL2Q05D32 466 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 DGKZQ13574 1117 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 SEPT2Q15019 361 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 R3HDMLQ9H3Y0 253 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 AS3MTQ9HBK9 375 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 TACC3Q9Y6A5 838 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
NPHP4-210ENST00000506941 PRDM1O75626 825 aa21.65■■□□□ 1.06
NPHP4-210ENST00000506941 CTCFP49711 727 aaPredicted RBP21.65■■□□□ 1.06
NPHP4-210ENST00000506941 GPAT2Q6NUI2 795 aa21.65■■□□□ 1.06
NPHP4-210ENST00000506941 CLEC10AQ8IUN9 316 aa21.65■■□□□ 1.06
NPHP4-210ENST00000506941 CABP5Q9NP86 173 aa21.65■■□□□ 1.06
NPHP4-210ENST00000506941 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
NPHP4-210ENST00000506941 SGSM2O43147 1006 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 TBC1D8O95759 1140 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 ALDH1A1P00352 501 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 LBX1P52954 281 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 HMGCS2P54868 508 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 MTMR2Q13614 643 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 GADL1Q6ZQY3 521 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 TMEM179Q6ZVK1 233 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 RUFY2Q8WXA3 655 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 CCDC17Q96LX7 622 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 DSCC1Q9BVC3 393 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 CFHR5Q9BXR6 569 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 NBPF3Q9H094 633 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 INCENPQ9NQS7 918 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 ZSWIM8A7E2V4 1837 aa21.64■■□□□ 1.05
NPHP4-210ENST00000506941 BACE1P56817 501 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms