RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF280CQ8ND82 737 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 PTPN18Q99952 460 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 HELLSQ9NRZ9 838 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 TRIM75PA6NK02 468 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 GSG1L2A8MUP6 293 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 USP17L12C9JPN9 530 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 USP17L21D6R901 530 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 HIP1O00291 1037 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 TBC1D8O95759 1140 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 APPP05067 770 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 TAF1CQ15572 869 aaPredicted RBP19.97■□□□□ 0.79
SNCA-209ENST00000506244 C12orf60Q5U649 245 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 CABP5Q9NP86 173 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 PTPRFP10586 1907 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 MYH8P13535 1937 aa19.97■□□□□ 0.79
SNCA-209ENST00000506244 BTBD19C9JJ37 291 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 PDE4AP27815 886 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 SHMT1P34896 483 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 RRP1BQ14684 758 aaKnown RBP19.96■□□□□ 0.79
SNCA-209ENST00000506244 ABCB5Q2M3G0 1257 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 SBK1Q52WX2 424 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 SEC62Q99442 399 aaKnown RBP19.96■□□□□ 0.79
SNCA-209ENST00000506244 WDR18Q9BV38 432 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 ZFYVE28Q9HCC9 887 aa19.96■□□□□ 0.79
SNCA-209ENST00000506244 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.79
SNCA-209ENST00000506244 PATL2C9JE40 543 aaKnown RBP19.95■□□□□ 0.78
SNCA-209ENST00000506244 GH2P01242 217 aa19.95■□□□□ 0.78
SNCA-209ENST00000506244 CYP2D6P10635 497 aa19.95■□□□□ 0.78
SNCA-209ENST00000506244 MFAP1P55081 439 aaKnown RBP19.95■□□□□ 0.78
SNCA-209ENST00000506244 CRHR2Q13324 411 aa19.95■□□□□ 0.78
SNCA-209ENST00000506244 COL13A1Q5TAT6 717 aaPredicted RBP19.95■□□□□ 0.78
SNCA-209ENST00000506244 CTR9Q6PD62 1173 aa19.95■□□□□ 0.78
SNCA-209ENST00000506244 PROCA1Q8NCQ7 364 aaPredicted RBP19.95■□□□□ 0.78
SNCA-209ENST00000506244 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.95■□□□□ 0.78
SNCA-209ENST00000506244 LOC285556D6RIA3 1793 aa19.95■□□□□ 0.78
SNCA-209ENST00000506244 GPR25O00155 361 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 SPP2Q13103 211 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 TTC22Q5TAA0 569 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 GADL1Q6ZQY3 521 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 C16orf86Q6ZW13 317 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 CCDC84Q86UT8 332 aaPredicted RBP19.94■□□□□ 0.78
SNCA-209ENST00000506244 PARK7Q99497 189 aaKnown RBP19.94■□□□□ 0.78
SNCA-209ENST00000506244 NAPBQ9H115 298 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 ZNF287Q9HBT7 754 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 EPB41L4AQ9HCS5 686 aaPredicted RBP19.94■□□□□ 0.78
SNCA-209ENST00000506244 DIAPH3Q9NSV4 1193 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 SLC45A1Q9Y2W3 748 aa19.94■□□□□ 0.78
SNCA-209ENST00000506244 PDHXO00330 501 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 FKTNO75072 461 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNCA-209ENST00000506244 RAB3GAP1Q15042 981 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 IFNL3Q8IZI9 196 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 CCDC17Q96LX7 622 aa19.93■□□□□ 0.78
SNCA-209ENST00000506244 CASP8AP2Q9UKL3 1982 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 CYP2D7A0A087X1C5 515 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 A0A0D9SFI3 127 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 C19orf81C9J6K1 198 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 USP17L10C9JJH3 530 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 MPHOSPH10O00566 681 aaKnown RBP19.92■□□□□ 0.78
SNCA-209ENST00000506244 SLC3A2P08195 630 aaKnown RBP19.92■□□□□ 0.78
SNCA-209ENST00000506244 SDSP20132 328 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 NMIQ13287 307 aaPredicted RBP19.92■□□□□ 0.78
SNCA-209ENST00000506244 MOGSQ13724 837 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 TMEM179Q6ZVK1 233 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 ZNF296Q8WUU4 475 aaPredicted RBP19.92■□□□□ 0.78
SNCA-209ENST00000506244 DYNLL2Q96FJ2 89 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 FAM227BQ96M60 508 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 FEZ1Q99689 392 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 TMOD4Q9NZQ9 345 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 PNMA3Q9UL41 463 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 AGTPBP1Q9UPW5 1226 aa19.92■□□□□ 0.78
SNCA-209ENST00000506244 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 CDK8P49336 464 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 HMGCS2P54868 508 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 BACE1P56817 501 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 MTMR2Q13614 643 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 SH3D19Q5HYK7 790 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 CCDC129Q6ZRS4 1044 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 TNS4Q8IZW8 715 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 CCDC171Q6TFL3 1326 aa19.91■□□□□ 0.78
SNCA-209ENST00000506244 TLR2O60603 784 aa19.9■□□□□ 0.78
SNCA-209ENST00000506244 USP14P54578 494 aa19.9■□□□□ 0.78
SNCA-209ENST00000506244 JAG1P78504 1218 aa19.9■□□□□ 0.78
SNCA-209ENST00000506244 EVX2Q03828 476 aa19.9■□□□□ 0.78
SNCA-209ENST00000506244 ZMYM6O95789 1325 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 GSPT1P15170 499 aaKnown RBP19.89■□□□□ 0.77
SNCA-209ENST00000506244 SHROOM1Q2M3G4 852 aaPredicted RBP19.89■□□□□ 0.77
SNCA-209ENST00000506244 GPAT2Q6NUI2 795 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 ERO1AQ96HE7 468 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 R3HDMLQ9H3Y0 253 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 SH2D4AQ9H788 454 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 MKNK2Q9HBH9 465 aa19.89■□□□□ 0.77
SNCA-209ENST00000506244 SP3Q02447 781 aa19.88■□□□□ 0.77
SNCA-209ENST00000506244 PDE4BQ07343 736 aa19.88■□□□□ 0.77
SNCA-209ENST00000506244 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
SNCA-209ENST00000506244 USP17L2Q6R6M4 530 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms