RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 FGRP09769 529 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 USP5P45974 858 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 RHBDL3P58872 404 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 KIAA2012Q0VF49 1180 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 CCDC93Q567U6 631 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 TGFBRAP1Q8WUH2 860 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 TMEM87BQ96K49 555 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
PDE4D-212ENST00000505453 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 OSBPP22059 807 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 C12orf60Q5U649 245 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 LY9Q9HBG7 655 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 ANGEL1Q9UNK9 670 aaKnown RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
PDE4D-212ENST00000505453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
PDE4D-212ENST00000505453 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 STX6O43752 255 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 PRDM1O75626 825 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 SCNN1DP51172 638 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 FKBP1AP62942 108 aaKnown RBP12.13□□□□□ -0.47
PDE4D-212ENST00000505453 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
PDE4D-212ENST00000505453 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
PDE4D-212ENST00000505453 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 ZKSCAN3Q9BRR0 538 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
PDE4D-212ENST00000505453 MTMR6Q9Y217 621 aa12.13□□□□□ -0.47
PDE4D-212ENST00000505453 MYO5AQ9Y4I1 1855 aaKnown RBP12.13□□□□□ -0.47
PDE4D-212ENST00000505453 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
PDE4D-212ENST00000505453 LIFRP42702 1097 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 SGMS1Q86VZ5 419 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 ESR2Q92731 530 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 DDX11Q96FC9 970 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 PSMD1Q99460 953 aa12.12□□□□□ -0.47
PDE4D-212ENST00000505453 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
PDE4D-212ENST00000505453 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 ORC4O43929 436 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 DYNLL2Q96FJ2 89 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 HRO43593 1189 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 CRKP46108 304 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 PLCD1P51178 756 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 WTAPQ15007 396 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 SEC23AQ15436 765 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-212ENST00000505453 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
PDE4D-212ENST00000505453 MYH7P12883 1935 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 ERICH2A1L162 156 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-212ENST00000505453 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-212ENST00000505453 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 F13A1P00488 732 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 FDPSP14324 419 aaKnown RBP12.1□□□□□ -0.47
PDE4D-212ENST00000505453 RXRAP19793 462 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 PDCP20941 246 aa12.1□□□□□ -0.47
PDE4D-212ENST00000505453 CDC27P30260 824 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms