RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 ROBO1Q9Y6N7 1651 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 CAMTA1Q9Y6Y1 1673 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 NOS3P29474 1203 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 SOX18P35713 384 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 TNNT3P45378 269 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 EIF4A2Q14240 407 aaKnown RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 ELMSAN1Q6PJG2 1045 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 ZNF771Q7L3S4 317 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 TREML1Q86YW5 311 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 CREBRFQ8IUR6 639 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 TP53INP1Q96A56 240 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 PLEKHF1Q96S99 279 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 GRPEL1Q9HAV7 217 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 ZFP64Q9NPA5 681 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 USP20Q9Y2K6 914 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 SRCAPQ6ZRS2 3230 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 KCNJ4P48050 445 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 HMGN5P82970 282 aaKnown RBP8.21□□□□□ -1.1
SSBP2-204ENST00000504985 MLLT1Q03111 559 aaPredicted RBP8.21□□□□□ -1.1
SSBP2-204ENST00000504985 GABPB1Q06547 395 aaPredicted RBP8.21□□□□□ -1.1
SSBP2-204ENST00000504985 HSP90AB2PQ58FF8 381 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 COL26A1Q96A83 441 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 SMG9Q9H0W8 520 aaKnown RBP8.21□□□□□ -1.1
SSBP2-204ENST00000504985 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 NUDCQ9Y266 331 aa8.21□□□□□ -1.1
SSBP2-204ENST00000504985 R3HCC1Q9Y3T6 440 aaKnown RBP8.21□□□□□ -1.1
SSBP2-204ENST00000504985 AHDC1Q5TGY3 1603 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-204ENST00000504985 COL18A1P39060 1754 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 TTC36A6NLP5 189 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 E9PSI1 815 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 MMP20O60882 483 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 XYLBO75191 536 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 SIK1P57059 783 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 OS9Q13438 667 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-204ENST00000504985 FAM26DQ5JW98 314 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-204ENST00000504985 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 TCP11L2Q8N4U5 519 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 MYCBPQ99417 103 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-204ENST00000504985 FEZ1Q99689 392 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 RAI14Q9P0K7 980 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 USP21Q9UK80 565 aa8.2□□□□□ -1.1
SSBP2-204ENST00000504985 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
SSBP2-204ENST00000504985 LMO7Q8WWI1 1683 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 ARHGEF10O15013 1369 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 ZNF500O60304 480 aaPredicted RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 HMOX1P09601 288 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 HOXC9P31274 260 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 MFAP1P55081 439 aaKnown RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 SATB1Q01826 763 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 PDE3BQ13370 1112 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 SKOR2Q2VWA4 1001 aaPredicted RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 EGFL6Q8IUX8 553 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 TMEM130Q8N3G9 435 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 NGEFQ8N5V2 710 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 GPATCH11Q8N954 259 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 MNS1Q8NEH6 495 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 MEGF10Q96KG7 1140 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 RRP7AQ9Y3A4 280 aaKnown RBP8.19□□□□□ -1.1
SSBP2-204ENST00000504985 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 ABCC6O95255 1503 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 RGPD2P0DJD1 1756 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 RGPD5Q99666 1765 aa8.19□□□□□ -1.1
SSBP2-204ENST00000504985 GCP02774 474 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 PRKAR2BP31323 418 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
SSBP2-204ENST00000504985 LRP8Q14114 963 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 HFE2Q6ZVN8 426 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
SSBP2-204ENST00000504985 KCNH5Q8NCM2 988 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 PLD4Q96BZ4 506 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 SAP130Q9H0E3 1048 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 BRMS1Q9HCU9 246 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 KDRP35968 1356 aa8.18□□□□□ -1.1
SSBP2-204ENST00000504985 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 NCAPD2Q15021 1401 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 J3QW42 95 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 RFX1P22670 979 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
SSBP2-204ENST00000504985 AMPHP49418 695 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 ANAPC15P60006 121 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 CCDC27Q2M243 656 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms