RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 VPS9D1Q9Y2B5 631 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 SALL1Q9NSC2 1324 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 NCOR1O75376 2440 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 PLIN1O60240 522 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 MAP4K4O95819 1239 aaPredicted RBP7.57□□□□□ -1.2
GYPB-204ENST00000504951 HOXA7P31268 230 aaPredicted RBP7.57□□□□□ -1.2
GYPB-204ENST00000504951 LRRC26Q2I0M4 334 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 ANKRD13CQ8N6S4 541 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 SOCS4Q8WXH5 440 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 TSR2Q969E8 191 aaKnown RBP7.57□□□□□ -1.2
GYPB-204ENST00000504951 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
GYPB-204ENST00000504951 DAGLAQ9Y4D2 1042 aa7.57□□□□□ -1.2
GYPB-204ENST00000504951 PTPRFP10586 1907 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 MSCO60682 206 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 FRAT2O75474 233 aaPredicted RBP7.56□□□□□ -1.2
GYPB-204ENST00000504951 PTPREP23469 700 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 NFIAQ12857 509 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 FKBP5Q13451 457 aaPredicted RBP7.56□□□□□ -1.2
GYPB-204ENST00000504951 C1orf53Q5VUE5 145 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
GYPB-204ENST00000504951 TRIB2Q92519 343 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 KAZALD1Q96I82 304 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 NUDT12Q9BQG2 462 aa7.56□□□□□ -1.2
GYPB-204ENST00000504951 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
GYPB-204ENST00000504951 OSBPL5Q9H0X9 879 aaPredicted RBP7.56□□□□□ -1.2
GYPB-204ENST00000504951 DDX60LQ5H9U9 1706 aaKnown RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 GOLGA8CPA6NN73 597 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 SEMA3EO15041 775 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 VAMP4O75379 141 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 IGHA2P01877 340 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 IFIT1P09914 478 aaKnown RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 MAPK4P31152 587 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 MDM2Q00987 491 aaPredicted RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 CACNB2Q08289 660 aaPredicted RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 TRIM32Q13049 653 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 SNX17Q15036 470 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 PPP1R15BQ5SWA1 713 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 MORN1Q5T089 497 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 GADL1Q6ZQY3 521 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 ZNF280CQ8ND82 737 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 USP40Q9NVE5 1235 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 CHMP3Q9Y3E7 222 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 LRRFIP2Q9Y608 721 aaKnown RBP7.55□□□□□ -1.2
GYPB-204ENST00000504951 RFX7Q2KHR2 1363 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
GYPB-204ENST00000504951 GAKO14976 1311 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 LAMA2P24043 3122 aaKnown RBP7.54□□□□□ -1.2
GYPB-204ENST00000504951 PTPN5P54829 565 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 TCP10Q12799 353 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 PUM3Q15397 648 aaKnown RBP7.54□□□□□ -1.2
GYPB-204ENST00000504951 TREML2Q5T2D2 321 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 ZFPM1Q8IX07 1006 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 LPIN2Q92539 896 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 LPAR1Q92633 364 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 FAM122AQ96E09 287 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 WDR18Q9BV38 432 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 ASCC2Q9H1I8 757 aaPredicted RBP7.54□□□□□ -1.2
GYPB-204ENST00000504951 TTYH1Q9H313 450 aaPredicted RBP7.54□□□□□ -1.2
GYPB-204ENST00000504951 C9orf78Q9NZ63 289 aaPredicted RBP7.54□□□□□ -1.2
GYPB-204ENST00000504951 PRUNE2Q8WUY3 3088 aa7.54□□□□□ -1.2
GYPB-204ENST00000504951 PDS5AQ29RF7 1337 aaKnown RBP7.53□□□□□ -1.2
GYPB-204ENST00000504951 PLXNB2O15031 1838 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 C19orf81C9J6K1 198 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 DNM1LO00429 736 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 LDHBP07195 334 aaKnown RBP7.53□□□□□ -1.2
GYPB-204ENST00000504951 HOXC6P09630 235 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 PDE4AP27815 886 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 RGS2P41220 211 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 RGS3P49796 1198 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 FOSBP53539 338 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 SHHQ15465 462 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 METTL24Q5JXM2 366 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 ZGPATQ8N5A5 531 aaKnown RBP7.53□□□□□ -1.2
GYPB-204ENST00000504951 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 IQSEC3Q9UPP2 1182 aaPredicted RBP7.53□□□□□ -1.2
GYPB-204ENST00000504951 CDH23Q9H251 3354 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
GYPB-204ENST00000504951 DDTLA6NHG4 134 aaPredicted RBP7.52□□□□□ -1.21
GYPB-204ENST00000504951 TRIM75PA6NK02 468 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 USP17L5A8MUK1 530 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 FOSL2P15408 326 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 ZKSCAN1P17029 563 aaPredicted RBP7.52□□□□□ -1.21
GYPB-204ENST00000504951 CYP2B6P20813 491 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 SPP2Q13103 211 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 LRRC24Q50LG9 513 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 METTL16Q86W50 562 aaKnown RBP7.52□□□□□ -1.21
GYPB-204ENST00000504951 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
GYPB-204ENST00000504951 ARRDC4Q8NCT1 418 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms