RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 GPC2Q8N158 579 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 SMARCC2Q8TAQ2 1214 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
DDX41-203ENST00000504781 PI4KBQ9UBF8 816 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 WDR33Q9C0J8 1336 aaKnown RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 TSPY2A6NKD2 308 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 ZBTB43O43298 467 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 BRD1O95696 1058 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 CYP2D6P10635 497 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 GJB2P29033 226 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 TFAP4Q01664 338 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 GABPAQ06546 454 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 STK3Q13188 491 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 PNMA8AQ86V59 439 aaPredicted RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 EHD4Q9H223 541 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
DDX41-203ENST00000504781 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
DDX41-203ENST00000504781 MYH1P12882 1939 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 STX6O43752 255 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 MYO1BO43795 1136 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 CDKL5O76039 1030 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 SYT1P21579 422 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 ZNF280AP59817 542 aaPredicted RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 ST3GAL1Q11201 340 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 MAP1SQ66K74 1059 aaPredicted RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 TDRD3Q9H7E2 651 aaKnown RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 CDK5RAP2Q96SN8 1893 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
DDX41-203ENST00000504781 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
DDX41-203ENST00000504781 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 CPLX1O14810 134 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 PRDM1O75626 825 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 TSPY3P0CV98 308 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 TSPY8P0CW00 308 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 RASA1P20936 1047 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 PTMSP20962 102 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 EPS15P42566 896 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 NOVP48745 357 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 METAP2P50579 478 aaKnown RBP eCLIP11.85□□□□□ -0.514e-6■■■■■ 28.4
DDX41-203ENST00000504781 NFKBIBQ15653 356 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 IFIT1BQ5T764 474 aaKnown RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 CATIPQ7Z7H3 387 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 FAM184AQ8NB25 1140 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 ZKSCAN3Q9BRR0 538 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
DDX41-203ENST00000504781 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 ATP6V1DQ9Y5K8 247 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 TNKSO95271 1327 aa11.85□□□□□ -0.51
DDX41-203ENST00000504781 SCN4AP35499 1836 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 NID2Q14112 1375 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 CTDNEP1O95476 244 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
DDX41-203ENST00000504781 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
DDX41-203ENST00000504781 PICALMQ13492 652 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 FAM151AQ8WW52 585 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
DDX41-203ENST00000504781 PASKQ96RG2 1323 aa11.84□□□□□ -0.51
DDX41-203ENST00000504781 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.51
DDX41-203ENST00000504781 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 H7C1D1 291 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 DDAH1O94760 285 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 IFNAR1P17181 557 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 MCM4P33991 863 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms