RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
HOXC9-202ENST00000504557 GH2P01242 217 aa17.18■□□□□ 0.34
HOXC9-202ENST00000504557 ASNSP08243 561 aa17.18■□□□□ 0.34
HOXC9-202ENST00000504557 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
HOXC9-202ENST00000504557 ZYXQ15942 572 aaKnown RBP17.18■□□□□ 0.34
HOXC9-202ENST00000504557 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
HOXC9-202ENST00000504557 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
HOXC9-202ENST00000504557 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
HOXC9-202ENST00000504557 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
HOXC9-202ENST00000504557 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
HOXC9-202ENST00000504557 MX1P20591 662 aa17.17■□□□□ 0.34
HOXC9-202ENST00000504557 LACTBP83111 547 aaPredicted RBP17.17■□□□□ 0.34
HOXC9-202ENST00000504557 UBE3CQ15386 1083 aa17.17■□□□□ 0.34
HOXC9-202ENST00000504557 CERKLQ49MI3 558 aaPredicted RBP17.17■□□□□ 0.34
HOXC9-202ENST00000504557 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
HOXC9-202ENST00000504557 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
HOXC9-202ENST00000504557 DOCK3Q8IZD9 2030 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
HOXC9-202ENST00000504557 ERC2O15083 957 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
HOXC9-202ENST00000504557 ARHGEF6Q15052 776 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
HOXC9-202ENST00000504557 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 SLC44A5Q8NCS7 719 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 FEZ1Q99689 392 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 EHD4Q9H223 541 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
HOXC9-202ENST00000504557 FMNL1O95466 1100 aaPredicted RBP17.15■□□□□ 0.34
HOXC9-202ENST00000504557 SHMT1P34896 483 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 PSMC4P43686 418 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
HOXC9-202ENST00000504557 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 TBC1D2Q9BYX2 928 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 PTCH2Q9Y6C5 1203 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 ADGRA2Q96PE1 1338 aa17.15■□□□□ 0.34
HOXC9-202ENST00000504557 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
HOXC9-202ENST00000504557 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
HOXC9-202ENST00000504557 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
HOXC9-202ENST00000504557 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
HOXC9-202ENST00000504557 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
HOXC9-202ENST00000504557 ANKRD13CQ8N6S4 541 aa17.14■□□□□ 0.33
HOXC9-202ENST00000504557 PROCA1Q8NCQ7 364 aaPredicted RBP17.14■□□□□ 0.33
HOXC9-202ENST00000504557 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
HOXC9-202ENST00000504557 PNMA3Q9UL41 463 aa17.14■□□□□ 0.33
HOXC9-202ENST00000504557 USP17L10C9JJH3 530 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 USP17L12C9JPN9 530 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 USP17L21D6R901 530 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 CTGFP29279 349 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 BACE1P56817 501 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 OSBP2Q969R2 916 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 ATP8A2Q9NTI2 1148 aa17.13■□□□□ 0.33
HOXC9-202ENST00000504557 M0R2C6 588 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 IGHDP01880 384 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 APPP05067 770 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 BCRP11274 1271 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 OSBPP22059 807 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
HOXC9-202ENST00000504557 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
HOXC9-202ENST00000504557 SEPT2Q15019 361 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 APPBP2Q92624 585 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
HOXC9-202ENST00000504557 FCGRTP55899 365 aa17.11■□□□□ 0.33
HOXC9-202ENST00000504557 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
HOXC9-202ENST00000504557 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
HOXC9-202ENST00000504557 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
HOXC9-202ENST00000504557 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
HOXC9-202ENST00000504557 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
HOXC9-202ENST00000504557 GINM1Q9NU53 330 aa17.11■□□□□ 0.33
HOXC9-202ENST00000504557 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
HOXC9-202ENST00000504557 KIAA0100Q14667 2235 aaKnown RBP17.11■□□□□ 0.33
HOXC9-202ENST00000504557 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 GPAA1O43292 621 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 PEX10O60683 326 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 ZFYP08048 801 aaPredicted RBP17.1■□□□□ 0.33
HOXC9-202ENST00000504557 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
HOXC9-202ENST00000504557 GABPAQ06546 454 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 AAMPQ13685 434 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
HOXC9-202ENST00000504557 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 CTR9Q6PD62 1173 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 MYPNQ86TC9 1320 aa17.1■□□□□ 0.33
HOXC9-202ENST00000504557 AKR1B1P15121 316 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 GUCY1A2P33402 732 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms