RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 SBK1Q52WX2 424 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 ZMYM1Q5SVZ6 1142 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 TATDN1Q6P1N9 297 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 OTUD7AQ8TE49 926 aaPredicted RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 RUFY2Q8WXA3 655 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 RILPL2Q969X0 211 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 PUS7LQ9H0K6 701 aaKnown RBP9.32□□□□□ -0.92
SKP2-203ENST00000504386 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
SKP2-203ENST00000504386 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
SKP2-203ENST00000504386 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
SKP2-203ENST00000504386 FKTNO75072 461 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 PDE4BQ07343 736 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 ABCB5Q2M3G0 1257 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 MCMDC2Q4G0Z9 681 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 TMEM179Q6ZVK1 233 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 PRRT2Q7Z6L0 340 aaPredicted RBP9.31□□□□□ -0.92
SKP2-203ENST00000504386 SDR42E1Q8WUS8 393 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 BRI3BPQ8WY22 251 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 OSBP2Q969R2 916 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 ZIC5Q96T25 663 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 FEZ1Q99689 392 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 NAPBQ9H115 298 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 AFG3L2Q9Y4W6 797 aa9.31□□□□□ -0.92
SKP2-203ENST00000504386 TRIM75PA6NK02 468 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 USP17L21D6R901 530 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 GPR25O00155 361 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
SKP2-203ENST00000504386 GNRH1P01148 92 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 PCP11498 1178 aaKnown RBP9.3□□□□□ -0.92
SKP2-203ENST00000504386 OSBPP22059 807 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 GJA5P36382 358 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 BACE1P56817 501 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 GABPAQ06546 454 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 MKNK2Q9HBH9 465 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 AGTPBP1Q9UPW5 1226 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 FOCADQ5VW36 1801 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 OTOFQ9HC10 1997 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 RAD50Q92878 1312 aa9.3□□□□□ -0.92
SKP2-203ENST00000504386 MYH7P12883 1935 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 BTBD19C9JJ37 291 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 PDHXO00330 501 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 TLR2O60603 784 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 GH2P01242 217 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 GCLCP48506 637 aaPredicted RBP9.29□□□□□ -0.92
SKP2-203ENST00000504386 PLCD1P51178 756 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 SPP2Q13103 211 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 RAB3GAP1Q15042 981 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 TTC22Q5TAA0 569 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 CTR9Q6PD62 1173 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 CASC1Q6TDU7 716 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 GADL1Q6ZQY3 521 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
SKP2-203ENST00000504386 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 SMCR8Q8TEV9 937 aaPredicted RBP9.29□□□□□ -0.92
SKP2-203ENST00000504386 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 KANSL2Q9H9L4 492 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 CTNNA3Q9UI47 895 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 SYNPO2Q9UMS6 1093 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 DOCK1Q14185 1865 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 LAMB1P07942 1786 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 ZMYM6O95789 1325 aa9.29□□□□□ -0.92
SKP2-203ENST00000504386 ROBO3Q96MS0 1386 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 MINDY4BA8MYZ0 360 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 MPHOSPH10O00566 681 aaKnown RBP9.28□□□□□ -0.92
SKP2-203ENST00000504386 PRKAB2O43741 272 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 GDF11O95390 407 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 TBC1D8O95759 1140 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 SDSP20132 328 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 HOXD10P28358 340 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 SHMT1P34896 483 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 CDK8P49336 464 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 PRMT2P55345 433 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
SKP2-203ENST00000504386 SP3Q02447 781 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 CRHR2Q13324 411 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 ALX1Q15699 326 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 IFNL3Q8IZI9 196 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 ZNF444Q8N0Y2 327 aaPredicted RBP9.28□□□□□ -0.92
SKP2-203ENST00000504386 LPAR1Q92633 364 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
SKP2-203ENST00000504386 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
SKP2-203ENST00000504386 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms