RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
PAPD4-207ENST00000504233 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
PAPD4-207ENST00000504233 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
PAPD4-207ENST00000504233 CUTAO60888 179 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 BMP6P22004 513 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 UBASH3AP57075 661 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
PAPD4-207ENST00000504233 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 BPIFA3Q9BQP9 254 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
PAPD4-207ENST00000504233 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 TNKSO95271 1327 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 GPATCH11Q8N954 259 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 SERTAD1Q9UHV2 236 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
PAPD4-207ENST00000504233 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 TAF1P21675 1872 aa12.94□□□□□ -0.34
PAPD4-207ENST00000504233 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 MYL5Q02045 173 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
PAPD4-207ENST00000504233 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 CHD4Q14839 1912 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 KLRK1P26718 216 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 OLFM4Q6UX06 510 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 PLEKHA4Q9H4M7 779 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 LCMT1Q9UIC8 334 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 IRX3P78415 501 aaPredicted RBP12.93□□□□□ -0.34
PAPD4-207ENST00000504233 ST5P78524 1137 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
PAPD4-207ENST00000504233 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 GNAT2P19087 354 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 CASP1P29466 404 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 WASF1Q92558 559 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
PAPD4-207ENST00000504233 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
PAPD4-207ENST00000504233 IKBKBO14920 756 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 NMT2O60551 498 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 DEXIO95424 95 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 IBSPP21815 317 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 AK7Q96M32 723 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 LRP5O75197 1615 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 WNT7AO00755 349 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 POSTNQ15063 836 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 ENAHQ8N8S7 591 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 CSRNP2Q9H175 543 aa12.91□□□□□ -0.34
PAPD4-207ENST00000504233 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 COL1A1P02452 1464 aaPredicted RBP12.91□□□□□ -0.34
PAPD4-207ENST00000504233 AFMP43652 599 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 ESR2Q92731 530 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 DHX58Q96C10 678 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 MYH2Q9UKX2 1941 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 PTPREP23469 700 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
PAPD4-207ENST00000504233 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
PAPD4-207ENST00000504233 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.34
PAPD4-207ENST00000504233 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.35
PAPD4-207ENST00000504233 SEC23AQ15436 765 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 FAM47AQ5JRC9 791 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.35
PAPD4-207ENST00000504233 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.35
PAPD4-207ENST00000504233 STAMQ92783 540 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 EPSTI1Q96J88 318 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 FEZ1Q99689 392 aa12.9□□□□□ -0.35
PAPD4-207ENST00000504233 INTS13Q9NVM9 706 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms