RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 TNPO2O14787 897 aaKnown RBP26.73■■□□□ 1.87
LSM6-203ENST00000503982 PRPF38BQ5VTL8 546 aaKnown RBP26.73■■□□□ 1.87
LSM6-203ENST00000503982 TTC6Q86TZ1 520 aa26.73■■□□□ 1.87
LSM6-203ENST00000503982 BOLA2Q9H3K6 86 aa26.73■■□□□ 1.87
LSM6-203ENST00000503982 POLR3DP05423 398 aaPredicted RBP26.72■■□□□ 1.87
LSM6-203ENST00000503982 PDE6AP16499 860 aa26.72■■□□□ 1.87
LSM6-203ENST00000503982 IRX3P78415 501 aaPredicted RBP26.72■■□□□ 1.87
LSM6-203ENST00000503982 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.72■■□□□ 1.87
LSM6-203ENST00000503982 YTHDC1Q96MU7 727 aaKnown RBP26.72■■□□□ 1.87
LSM6-203ENST00000503982 ZBTB21Q9ULJ3 1066 aa26.72■■□□□ 1.87
LSM6-203ENST00000503982 WDR18Q9BV38 432 aa26.71■■□□□ 1.87
LSM6-203ENST00000503982 CRNKL1Q9BZJ0 848 aaKnown RBP26.71■■□□□ 1.87
LSM6-203ENST00000503982 GINM1Q9NU53 330 aa26.71■■□□□ 1.87
LSM6-203ENST00000503982 GABRQQ9UN88 632 aa26.71■■□□□ 1.87
LSM6-203ENST00000503982 ZNF532Q9HCE3 1301 aa26.7■■□□□ 1.87
LSM6-203ENST00000503982 UBXN2AP68543 259 aa26.7■■□□□ 1.86
LSM6-203ENST00000503982 SHROOM1Q2M3G4 852 aaPredicted RBP26.7■■□□□ 1.86
LSM6-203ENST00000503982 COA7Q96BR5 231 aa26.7■■□□□ 1.86
LSM6-203ENST00000503982 EDC3Q96F86 508 aaKnown RBP26.7■■□□□ 1.86
LSM6-203ENST00000503982 LRRCC1Q9C099 1032 aa26.7■■□□□ 1.86
LSM6-203ENST00000503982 PAG1Q9NWQ8 432 aa26.7■■□□□ 1.86
LSM6-203ENST00000503982 SERPINB13Q9UIV8 391 aa26.7■■□□□ 1.86
LSM6-203ENST00000503982 MYH7P12883 1935 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 USP17L10C9JJH3 530 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 GH2P01242 217 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 BACE1P56817 501 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 JAG1P78504 1218 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 SH3D19Q5HYK7 790 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 METTL16Q86W50 562 aaKnown RBP26.69■■□□□ 1.86
LSM6-203ENST00000503982 FEZ1Q99689 392 aa26.69■■□□□ 1.86
LSM6-203ENST00000503982 ASCC2Q9H1I8 757 aaPredicted RBP26.69■■□□□ 1.86
LSM6-203ENST00000503982 C19orf81C9J6K1 198 aa26.68■■□□□ 1.86
LSM6-203ENST00000503982 SMARCA5O60264 1052 aaPredicted RBP26.68■■□□□ 1.86
LSM6-203ENST00000503982 GCLCP48506 637 aaPredicted RBP26.68■■□□□ 1.86
LSM6-203ENST00000503982 MTFR1Q15390 333 aa26.68■■□□□ 1.86
LSM6-203ENST00000503982 FAM110CQ1W6H9 321 aa26.68■■□□□ 1.86
LSM6-203ENST00000503982 SLAIN1Q8ND83 568 aa26.68■■□□□ 1.86
LSM6-203ENST00000503982 RIOK1Q9BRS2 568 aaKnown RBP26.68■■□□□ 1.86
LSM6-203ENST00000503982 DOCK3Q8IZD9 2030 aa26.68■■□□□ 1.86
LSM6-203ENST00000503982 MYH8P13535 1937 aa26.67■■□□□ 1.86
LSM6-203ENST00000503982 RAB3GAP1Q15042 981 aa26.67■■□□□ 1.86
LSM6-203ENST00000503982 ZYXQ15942 572 aaKnown RBP26.67■■□□□ 1.86
LSM6-203ENST00000503982 CERKLQ49MI3 558 aaPredicted RBP26.67■■□□□ 1.86
LSM6-203ENST00000503982 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.67■■□□□ 1.86
LSM6-203ENST00000503982 CABP5Q9NP86 173 aa26.67■■□□□ 1.86
LSM6-203ENST00000503982 MCM9Q9NXL9 1143 aa26.67■■□□□ 1.86
LSM6-203ENST00000503982 ADCY3O60266 1144 aa26.66■■□□□ 1.86
LSM6-203ENST00000503982 FLT3LGP49771 235 aa26.66■■□□□ 1.86
LSM6-203ENST00000503982 ATP5JP18859 108 aa26.65■■□□□ 1.86
LSM6-203ENST00000503982 ABCB5Q2M3G0 1257 aa26.65■■□□□ 1.86
LSM6-203ENST00000503982 USP17L2Q6R6M4 530 aa26.65■■□□□ 1.86
LSM6-203ENST00000503982 RNF208Q9H0X6 261 aa26.65■■□□□ 1.86
LSM6-203ENST00000503982 EHD4Q9H223 541 aa26.65■■□□□ 1.86
LSM6-203ENST00000503982 CCL5P13501 91 aa26.64■■□□□ 1.86
LSM6-203ENST00000503982 LCORLQ8N3X6 602 aa26.64■■□□□ 1.86
LSM6-203ENST00000503982 SDR42E1Q8WUS8 393 aa26.64■■□□□ 1.86
LSM6-203ENST00000503982 ARMT1Q9H993 441 aa26.64■■□□□ 1.86
LSM6-203ENST00000503982 DDX60LQ5H9U9 1706 aaKnown RBP26.63■■□□□ 1.85
LSM6-203ENST00000503982 MPHOSPH10O00566 681 aaKnown RBP26.63■■□□□ 1.85
LSM6-203ENST00000503982 ELNP15502 786 aa26.63■■□□□ 1.85
LSM6-203ENST00000503982 PLCD1P51178 756 aa26.63■■□□□ 1.85
LSM6-203ENST00000503982 TATDN1Q6P1N9 297 aa26.63■■□□□ 1.85
LSM6-203ENST00000503982 HAUS7Q99871 368 aa26.63■■□□□ 1.85
LSM6-203ENST00000503982 BAZ2AQ9UIF9 1905 aaKnown RBP26.63■■□□□ 1.85
LSM6-203ENST00000503982 CCAR1Q8IX12 1150 aaKnown RBP26.62■■□□□ 1.85
LSM6-203ENST00000503982 NKX2-3Q8TAU0 364 aa26.62■■□□□ 1.85
LSM6-203ENST00000503982 P2RX7Q99572 595 aaKnown RBP26.62■■□□□ 1.85
LSM6-203ENST00000503982 TCRBV5S4A2TA0A5A2 114 aa26.61■■□□□ 1.85
LSM6-203ENST00000503982 MBD4O95243 580 aa26.61■■□□□ 1.85
LSM6-203ENST00000503982 ADD2P35612 726 aa26.61■■□□□ 1.85
LSM6-203ENST00000503982 GPATCH3Q96I76 525 aa26.61■■□□□ 1.85
LSM6-203ENST00000503982 CWC22Q9HCG8 908 aaKnown RBP26.61■■□□□ 1.85
LSM6-203ENST00000503982 INHAP05111 366 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 HOXA7P31268 230 aaPredicted RBP26.6■■□□□ 1.85
LSM6-203ENST00000503982 HERVK_113P62684 666 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 SLFNL1Q499Z3 407 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 ZSCAN25Q6NSZ9 544 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 AMOTL1Q8IY63 956 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 DDRGK1Q96HY6 314 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 PAGR1Q9BTK6 254 aa26.6■■□□□ 1.85
LSM6-203ENST00000503982 SHMT1P34896 483 aa26.59■■□□□ 1.85
LSM6-203ENST00000503982 USP14P54578 494 aa26.59■■□□□ 1.85
LSM6-203ENST00000503982 IRF5Q13568 498 aa26.59■■□□□ 1.85
LSM6-203ENST00000503982 UNC93B1Q9H1C4 597 aa26.59■■□□□ 1.85
LSM6-203ENST00000503982 EMILIN3Q9NT22 766 aa26.59■■□□□ 1.85
LSM6-203ENST00000503982 GPRC5AQ8NFJ5 357 aa26.58■■□□□ 1.85
LSM6-203ENST00000503982 PXYLP1Q8TE99 480 aa26.58■■□□□ 1.85
LSM6-203ENST00000503982 DCP1AQ9NPI6 582 aaPredicted RBP26.58■■□□□ 1.85
LSM6-203ENST00000503982 ECHDC1Q9NTX5 307 aa26.58■■□□□ 1.85
LSM6-203ENST00000503982 GJB1P08034 283 aa26.57■■□□□ 1.84
LSM6-203ENST00000503982 CYP2D6P10635 497 aa26.57■■□□□ 1.84
LSM6-203ENST00000503982 GTF3C2Q8WUA4 911 aaPredicted RBP26.57■■□□□ 1.84
LSM6-203ENST00000503982 PRKAB2O43741 272 aa26.56■■□□□ 1.84
LSM6-203ENST00000503982 PEX10O60683 326 aa26.56■■□□□ 1.84
LSM6-203ENST00000503982 ACER1Q8TDN7 264 aa26.56■■□□□ 1.84
LSM6-203ENST00000503982 MORF4L1Q9UBU8 362 aa26.56■■□□□ 1.84
LSM6-203ENST00000503982 BRCA2P51587 3418 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L15C9J2P7 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L13C9JLJ4 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L11C9JVI0 530 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms