RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 KRT82Q9NSB4 513 aa6.45□□□□□ -1.38
SMN2-204ENST00000503678 COL4A3BPQ9Y5P4 624 aa6.45□□□□□ -1.38
SMN2-204ENST00000503678 SLC12A7Q9Y666 1083 aa6.45□□□□□ -1.38
SMN2-204ENST00000503678 ESYT3A0FGR9 886 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
SMN2-204ENST00000503678 SOX1O00570 391 aaPredicted RBP6.44□□□□□ -1.38
SMN2-204ENST00000503678 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 DDAH1O94760 285 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 MED26O95402 600 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 CYP11A1P05108 521 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 EPHA1P21709 976 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 GUCY2CP25092 1073 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 MLECQ14165 292 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 C2orf27AQ580R0 203 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 C16orf86Q6ZW13 317 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 MICAL1Q8TDZ2 1067 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 THAP3Q8WTV1 239 aaPredicted RBP6.44□□□□□ -1.38
SMN2-204ENST00000503678 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 KANSL2Q9H9L4 492 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 TACC3Q9Y6A5 838 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 SNCAIPQ9Y6H5 919 aa6.44□□□□□ -1.38
SMN2-204ENST00000503678 A0A1W2PQH9 124 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 GFRA2O00451 464 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 RAB11FIP3O75154 756 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 HTR3BO95264 441 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 ARL4DP49703 201 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 PIP4K2BP78356 416 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 GSTM4Q03013 218 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 GRIK5Q16478 980 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
SMN2-204ENST00000503678 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
SMN2-204ENST00000503678 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 ACSBG1Q96GR2 724 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 FEZ1Q99689 392 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 METTL14Q9HCE5 456 aaKnown RBP6.43□□□□□ -1.38
SMN2-204ENST00000503678 PCDH12Q9NPG4 1184 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 PCDHA4Q9UN74 947 aa6.43□□□□□ -1.38
SMN2-204ENST00000503678 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 SQSTM1Q13501 440 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 WIPI1Q5MNZ9 446 aaPredicted RBP6.42□□□□□ -1.38
SMN2-204ENST00000503678 FAM117BQ6P1L5 589 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 MPRIPQ6WCQ1 1025 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 RUFY4Q6ZNE9 571 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 FAM178BQ8IXR5 827 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 GPBAR1Q8TDU6 330 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 CORO1BQ9BR76 489 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 GMIPQ9P107 970 aa6.42□□□□□ -1.38
SMN2-204ENST00000503678 GYS2P54840 703 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 INTS3Q68E01 1043 aaKnown RBP6.41□□□□□ -1.38
SMN2-204ENST00000503678 C6orf15Q6UXA7 325 aaPredicted RBP6.41□□□□□ -1.38
SMN2-204ENST00000503678 HDXQ7Z353 690 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 TMEM130Q8N3G9 435 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 OSGEPQ9NPF4 335 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 ZMYM5Q9UJ78 669 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 LEMD3Q9Y2U8 911 aa6.41□□□□□ -1.38
SMN2-204ENST00000503678 GSC2O15499 205 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 PDE4BQ07343 736 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.38
SMN2-204ENST00000503678 NCAPHQ15003 741 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 POU4F3Q15319 338 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 TCEA2Q15560 299 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 EEPD1Q7L9B9 569 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 IL22RA1Q8N6P7 574 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 DCAF11Q8TEB1 546 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 SLC7A3Q8WY07 619 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 NRSN2Q9GZP1 204 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.38
SMN2-204ENST00000503678 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 REV1Q9UBZ9 1251 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 PPME1Q9Y570 386 aa6.4□□□□□ -1.38
SMN2-204ENST00000503678 KDM2BQ8NHM5 1336 aa6.4□□□□□ -1.39
SMN2-204ENST00000503678 B2RBV5 119 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 DEAF1O75398 565 aaPredicted RBP6.39□□□□□ -1.39
SMN2-204ENST00000503678 CDK8P49336 464 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 INPP5AQ14642 412 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 LONRF2Q1L5Z9 754 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 HP1BP3Q5SSJ5 553 aaPredicted RBP6.39□□□□□ -1.39
SMN2-204ENST00000503678 LRFN4Q6PJG9 635 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 SPATC1Q76KD6 591 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 ELMO3Q96BJ8 720 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 ATG4CQ96DT6 458 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 ZC3H12CQ9C0D7 883 aaKnown RBP6.39□□□□□ -1.39
SMN2-204ENST00000503678 EPN3Q9H201 632 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 CCDC86Q9H6F5 360 aaKnown RBP6.39□□□□□ -1.39
SMN2-204ENST00000503678 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
SMN2-204ENST00000503678 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 DLL1O00548 723 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 MARCH6O60337 910 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 DIAPH1O60610 1272 aaKnown RBP6.38□□□□□ -1.39
SMN2-204ENST00000503678 NME1P15531 152 aaKnown RBP6.38□□□□□ -1.39
SMN2-204ENST00000503678 MAOBP27338 520 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 JAG1P78504 1218 aa6.38□□□□□ -1.39
SMN2-204ENST00000503678 ZC3H12BQ5HYM0 836 aaKnown RBP6.38□□□□□ -1.39
SMN2-204ENST00000503678 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms