RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 IL25Q9H293 177 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 KCNH4Q9UQ05 1017 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 PHIPQ8WWQ0 1821 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 ROBO3Q96MS0 1386 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 CHMLP26374 656 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 SREBF2Q12772 1141 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 BMP2KLQ5H9B9 411 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 C16orf86Q6ZW13 317 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 NACAP1Q9BZK3 213 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
SMAD1-204ENST00000503324 HSPD1P10809 573 aaKnown RBP21.2■□□□□ 0.98
SMAD1-204ENST00000503324 GTF2A2P52657 109 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 ALX1Q15699 326 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 BRI3BPQ8WY22 251 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 NAPBQ9H115 298 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 GINM1Q9NU53 330 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 ZBTB21Q9ULJ3 1066 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 AFG3L2Q9Y4W6 797 aa21.2■□□□□ 0.98
SMAD1-204ENST00000503324 MINDY4BA8MYZ0 360 aa21.19■□□□□ 0.98
SMAD1-204ENST00000503324 ASNSP08243 561 aa21.19■□□□□ 0.98
SMAD1-204ENST00000503324 CDK8P49336 464 aa21.19■□□□□ 0.98
SMAD1-204ENST00000503324 INHBEP58166 350 aa21.19■□□□□ 0.98
SMAD1-204ENST00000503324 CERKLQ49MI3 558 aaPredicted RBP21.19■□□□□ 0.98
SMAD1-204ENST00000503324 PTPN18Q99952 460 aa21.19■□□□□ 0.98
SMAD1-204ENST00000503324 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 IGF2BP3O00425 579 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMAD1-204ENST00000503324 GH2P01242 217 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 SNAPC2Q13487 334 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 MOGSQ13724 837 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 CCL15Q16663 113 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 IFNL1Q8IU54 200 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 RNF186Q9NXI6 227 aa21.18■□□□□ 0.98
SMAD1-204ENST00000503324 USP17L5A8MUK1 530 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 CXCL11O14625 94 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 FOXN1O15353 648 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 CETPP11597 493 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 GUCY1A2P33402 732 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 MFAP1P55081 439 aaKnown RBP21.17■□□□□ 0.98
SMAD1-204ENST00000503324 ABCB5Q2M3G0 1257 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 ZMYM6O95789 1325 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 RAD50Q92878 1312 aa21.17■□□□□ 0.98
SMAD1-204ENST00000503324 A0A0G2JLL6 359 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-204ENST00000503324 FGAP02671 866 aa21.16■□□□□ 0.98
SMAD1-204ENST00000503324 PPARAQ07869 468 aa21.16■□□□□ 0.98
SMAD1-204ENST00000503324 PRRT2Q7Z6L0 340 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-204ENST00000503324 WDR18Q9BV38 432 aa21.16■□□□□ 0.98
SMAD1-204ENST00000503324 TBC1D2Q9BYX2 928 aa21.16■□□□□ 0.98
SMAD1-204ENST00000503324 SAGE1Q9NXZ1 904 aa21.16■□□□□ 0.98
SMAD1-204ENST00000503324 TRIM75PA6NK02 468 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 CA12O43570 354 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 AKR1B1P15121 316 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 SPP2Q13103 211 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 STK11IPQ8N1F8 1099 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 ZNF280CQ8ND82 737 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 BEGAINQ9BUH8 593 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 PTPRFP10586 1907 aa21.15■□□□□ 0.98
SMAD1-204ENST00000503324 MYH8P13535 1937 aa21.14■□□□□ 0.98
SMAD1-204ENST00000503324 TRPA1O75762 1119 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 RASA1P20936 1047 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 FAM43AQ8N2R8 423 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 RUFY2Q8WXA3 655 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 DSCC1Q9BVC3 393 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 AS3MTQ9HBK9 375 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 CABP5Q9NP86 173 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 ANAPC4Q9UJX5 808 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 TACC3Q9Y6A5 838 aa21.14■□□□□ 0.97
SMAD1-204ENST00000503324 BTBD19C9JJ37 291 aa21.13■□□□□ 0.97
SMAD1-204ENST00000503324 SGSM2O43147 1006 aa21.13■□□□□ 0.97
SMAD1-204ENST00000503324 HSPA8P11142 646 aaKnown RBP21.13■□□□□ 0.97
SMAD1-204ENST00000503324 SEPT2Q15019 361 aa21.13■□□□□ 0.97
SMAD1-204ENST00000503324 CCDC17Q96LX7 622 aa21.13■□□□□ 0.97
SMAD1-204ENST00000503324 TSKSQ9UJT2 592 aa21.13■□□□□ 0.97
SMAD1-204ENST00000503324 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
SMAD1-204ENST00000503324 CTDSPL2Q05D32 466 aa21.12■□□□□ 0.97
SMAD1-204ENST00000503324 RAB3GAP1Q15042 981 aa21.12■□□□□ 0.97
SMAD1-204ENST00000503324 GPAT2Q6NUI2 795 aa21.12■□□□□ 0.97
SMAD1-204ENST00000503324 TMEM179Q6ZVK1 233 aa21.12■□□□□ 0.97
SMAD1-204ENST00000503324 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMAD1-204ENST00000503324 CFHR5Q9BXR6 569 aa21.12■□□□□ 0.97
SMAD1-204ENST00000503324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMAD1-204ENST00000503324 PRDM1O75626 825 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 ALDH1A1P00352 501 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 CTCFP49711 727 aaPredicted RBP21.11■□□□□ 0.97
SMAD1-204ENST00000503324 BACE1P56817 501 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 SH3D19Q5HYK7 790 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 ANKRD23Q86SG2 305 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 NBPF3Q9H094 633 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 MKNK2Q9HBH9 465 aa21.11■□□□□ 0.97
SMAD1-204ENST00000503324 GREB1LQ9C091 1923 aaPredicted RBP21.11■□□□□ 0.97
SMAD1-204ENST00000503324 SLC3A2P08195 630 aaKnown RBP21.1■□□□□ 0.97
SMAD1-204ENST00000503324 DGKZQ13574 1117 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 MTMR2Q13614 643 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 OTUD7BQ6GQQ9 843 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 FASTKD5Q7L8L6 764 aaKnown RBP21.1■□□□□ 0.97
SMAD1-204ENST00000503324 SIAH1Q8IUQ4 282 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 ACER1Q8TDN7 264 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 R3HDMLQ9H3Y0 253 aa21.1■□□□□ 0.97
SMAD1-204ENST00000503324 ZCCHC17Q9NP64 241 aaKnown RBP21.1■□□□□ 0.97
SMAD1-204ENST00000503324 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms