RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DNAJC18Q9H819 358 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 HMX1Q9NP08 348 aaPredicted RBP7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 OGDHLQ9ULD0 1010 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 ZNF236Q9UL36 1845 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 TRIOBPQ9H2D6 2365 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 SZT2Q5T011 3432 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 EVI5O60447 810 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 MYCP01106 439 aaPredicted RBP7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 TFRCP02786 760 aaKnown RBP7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 HLA-DOAP06340 250 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 ELNP15502 786 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 USP14P54578 494 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 HERVK_113P62684 666 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 TTC39AQ5SRH9 613 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 TMEM57Q8N5G2 664 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 GPRC5AQ8NFJ5 357 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 GDF15Q99988 308 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 NBPF3Q9H094 633 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 AATFQ9NY61 560 aaKnown RBP eCLIP7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 TMOD4Q9NZQ9 345 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 ZBTB21Q9ULJ3 1066 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 RANBP2P49792 3224 aaKnown RBP7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
LSM3P4-201ENST00000502948 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 SURF6O75683 361 aaKnown RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 BCAR3O75815 825 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 HOXC6P09630 235 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 COL6A1P12109 1028 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 MNX1P50219 401 aaPredicted RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 IRX3P78415 501 aaPredicted RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 MTMR2Q13614 643 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 MORN1Q5T089 497 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L2Q6R6M4 530 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 ADGRA1Q86SQ6 560 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 ERC1Q8IUD2 1116 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 TGFBRAP1Q8WUH2 860 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 PAWRQ96IZ0 340 aaKnown RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 KIAA1683Q9H0B3 1180 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 SERPINB13Q9UIV8 391 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 DBNLQ9UJU6 430 aaKnown RBP7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 RABGAP1Q9Y3P9 1069 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 MYH8P13535 1937 aa7.46□□□□□ -1.22
LSM3P4-201ENST00000502948 NAV1Q8NEY1 1877 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 RLFQ13129 1914 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 MSCO60682 206 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 GLRX3O76003 335 aaKnown RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 IGHA2P01877 340 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 RGS2P41220 211 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 ERVK-9P63128 1117 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 ERVK-24P63145 666 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 CCNA1P78396 465 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 MAP3K12Q12852 859 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 PDE3AQ14432 1141 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 LRIT3Q3SXY7 679 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 HSP90AB4PQ58FF6 505 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 TTC6Q86TZ1 520 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 CCDC84Q86UT8 332 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 TRIB2Q92519 343 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 FRAT1Q92837 279 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 EAF2Q96CJ1 260 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 EMILIN3Q9NT22 766 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 PARP14Q460N5 1801 aa7.45□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 MS4A1P11836 297 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 ZAP70P43403 619 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 JAG1P78504 1218 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 GABPAQ06546 454 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 OS9Q13438 667 aaPredicted RBP7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 CATSPERGQ6ZRH7 1159 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 GPR142Q7Z601 462 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 MAPKAPK5Q8IW41 473 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 APBA2Q99767 749 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 RIOK1Q9BRS2 568 aaKnown RBP7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 C11orf49Q9H6J7 331 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 TXNRD2Q9NNW7 524 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 PIH1D3Q9NQM4 214 aaKnown RBP7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 PALD1Q9ULE6 856 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 MYH7P12883 1935 aa7.44□□□□□ -1.22
LSM3P4-201ENST00000502948 LAMA3Q16787 3333 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 SLC15A5A6NIM6 579 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 STRNO43815 780 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms