RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 FKBP5Q13451 457 aaPredicted RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 ADGRE1Q14246 886 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 AAK1Q2M2I8 961 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 METTL24Q5JXM2 366 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 MAP3K21Q5TCX8 1036 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 PLEKHH3Q7Z736 793 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 TRMT44Q8IYL2 757 aaKnown RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 LINS1Q8NG48 757 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 LPAR1Q92633 364 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 FRAT1Q92837 279 aaPredicted RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 EDC3Q96F86 508 aaKnown RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 PUS3Q9BZE2 481 aaKnown RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 NKX2-4Q9H2Z4 354 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
HTT-202ENST00000502820 PDLIM7Q9NR12 457 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 MSRAQ9UJ68 235 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 RCAN3Q9UKA8 241 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 DDX60LQ5H9U9 1706 aaKnown RBP6.31□□□□□ -1.4
HTT-202ENST00000502820 PHF20L1A8MW92 1017 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 ACRP10323 421 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 BMP1P13497 986 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 NCLP19338 710 aaKnown RBP6.31□□□□□ -1.4
HTT-202ENST00000502820 ITGB8P26012 769 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 MAPK4P31152 587 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 RGS3P49796 1198 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 UBE4AQ14139 1066 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 Q3C1V9 767 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 AKNAD1Q5T1N1 836 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 FKBP1CQ5VVH2 108 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 GPR142Q7Z601 462 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 ZNF280CQ8ND82 737 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 DNAAF4Q8WXU2 420 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 KHSRPQ92945 711 aaKnown RBP eCLIP6.31□□□□□ -1.4
HTT-202ENST00000502820 APBA2Q99767 749 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 PBX4Q9BYU1 374 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 PORCNQ9H237 461 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 RTN4Q9NQC3 1192 aaKnown RBP6.31□□□□□ -1.4
HTT-202ENST00000502820 FLRT1Q9NZU1 646 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 FAM198AQ9UFP1 575 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 DAGLAQ9Y4D2 1042 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
HTT-202ENST00000502820 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 PSME4Q14997 1843 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 COL2A1P02458 1487 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 DDTLA6NHG4 134 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 MSCO60682 206 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 CTNND1O60716 968 aaKnown RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 CLTBP09497 229 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 SSTR3P32745 418 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 FOXO4P98177 505 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 MTMR2Q13614 643 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 ZYXQ15942 572 aaKnown RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 PRAMEF19Q5SWL8 479 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 BEND3Q5T5X7 828 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 DPP9Q86TI2 863 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 VTI1AQ96AJ9 217 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 CERS4Q9HA82 394 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 TXNRD2Q9NNW7 524 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 CXXC1Q9P0U4 656 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 ARIH1Q9Y4X5 557 aaPredicted RBP6.3□□□□□ -1.4
HTT-202ENST00000502820 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
HTT-202ENST00000502820 ALPK3Q96L96 1907 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 F6X3S4 739 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 RFXAPO00287 272 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 GLRX3O76003 335 aaKnown RBP6.29□□□□□ -1.4
HTT-202ENST00000502820 LDHBP07195 334 aaKnown RBP6.29□□□□□ -1.4
HTT-202ENST00000502820 PRDX5P30044 214 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 RABGGTBP53611 331 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 HERVK_113P62684 666 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 ERVK-24P63145 666 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 NHLH1Q02575 133 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 MAP2K5Q13163 448 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 EPHA10Q5JZY3 1008 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 PPP2R2DQ66LE6 453 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 SAMD1Q6SPF0 538 aaPredicted RBP6.29□□□□□ -1.4
HTT-202ENST00000502820 FBXO33Q7Z6M2 555 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 PROCA1Q8NCQ7 364 aaPredicted RBP6.29□□□□□ -1.4
HTT-202ENST00000502820 SLC44A5Q8NCS7 719 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
HTT-202ENST00000502820 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 PDCL3Q9H2J4 239 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 SPEF2Q9C093 1822 aa6.29□□□□□ -1.4
HTT-202ENST00000502820 USP17L5A8MUK1 530 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 DCDC2CA8MYV0 355 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 E9PSI1 815 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 GTPBP6O43824 516 aaPredicted RBP6.28□□□□□ -1.4
HTT-202ENST00000502820 GPR37L1O60883 481 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 IFIT1P09914 478 aaKnown RBP6.28□□□□□ -1.4
HTT-202ENST00000502820 SLFN5Q08AF3 891 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 LRRC24Q50LG9 513 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms