RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 OSGEPQ9NPF4 335 aa4.44□□□□□ -1.7
SUB1-202ENST00000502453 PHACTR2O75167 634 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 KMT5BQ4FZB7 885 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 RNF219Q5W0B1 726 aaPredicted RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 PKN3Q6P5Z2 889 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 TOGARAM2Q6ZUX3 1019 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 NELL2Q99435 816 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 RAB6BQ9NRW1 208 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 VPS9D1Q9Y2B5 631 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 ZNF652Q9Y2D9 606 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 GPR39O43194 453 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 GFPT2O94808 682 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 FLT3P36888 993 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 GIPRP48546 466 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 HSP90AA2PQ14568 343 aaPredicted RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 PCBP1Q15365 356 aaKnown RBP eCLIP4.43□□□□□ -1.7
SUB1-202ENST00000502453 LINC01559Q495D7 138 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 SYDE2Q5VT97 1194 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 TSHZ3Q63HK5 1081 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 CDHR1Q96JP9 859 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 RUSC1Q9BVN2 902 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 SRCIN1Q9C0H9 1055 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 NCOA5Q9HCD5 579 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 AAASQ9NRG9 546 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 VPS45Q9NRW7 570 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 CLK1P49759 484 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 EPHA4P54764 986 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 PSMA6P60900 246 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 GRM2Q14416 872 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 FOXB2Q5VYV0 432 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 HEATR6Q6AI08 1181 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 MZT2AQ6P582 158 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 PHC3Q8NDX5 983 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 RNF217Q8TC41 542 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 CRB3Q9BUF7 120 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 SPATA9Q9BWV2 254 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 EVA1BQ9NVM1 165 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 TMCC3Q9ULS5 477 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 ERBB4Q15303 1308 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 PHLDB1Q86UU1 1377 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 J3KRW8 73 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 IARSP41252 1262 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 STT3AP46977 705 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 WDR45BQ5MNZ6 344 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 CXorf57Q6NSI4 855 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 ZNF438Q7Z4V0 828 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 NSUN6Q8TEA1 469 aaKnown RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 FBXO41Q8TF61 875 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 USP7Q93009 1102 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 MYD88Q99836 296 aa4.43□□□□□ -1.7
SUB1-202ENST00000502453 PDGFDQ9GZP0 370 aaPredicted RBP4.43□□□□□ -1.7
SUB1-202ENST00000502453 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 BHMG1C9JSJ3 638 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 CELA3AP09093 270 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ZNF131P52739 623 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 SLC9A5Q14940 896 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 FAM209AQ5JX71 171 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 LDHAL6AQ6ZMR3 332 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 LCA5Q86VQ0 697 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 SPATS2Q86XZ4 545 aaKnown RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 ALDH16A1Q8IZ83 802 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ZNF713Q8N859 430 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 RHOVQ96L33 236 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 BARD1Q99728 777 aaKnown RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 APOL5Q9BWW9 433 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 RFPL1O75677 317 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 NCAM1P13591 858 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ECE1P42892 770 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 YOD1Q5VVQ6 348 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 ZCCHC8Q6NZY4 707 aaKnown RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 BNC2Q6ZN30 1099 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 EPM2AIP1Q7L775 607 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 PNMA8AQ86V59 439 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 SLFN12Q8IYM2 578 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 HVCN1Q96D96 273 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ETNK1Q9HBU6 452 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 STK26Q9P289 416 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 RABGEF1Q9UJ41 708 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ANO9A1A5B4 782 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 LRRC10BA6NIK2 292 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 GREM1O60565 184 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 PYGMP11217 842 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 SNX16P57768 344 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 C11orf91Q3C1V1 193 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 IQSEC1Q6DN90 963 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 LRRC69Q6ZNQ3 347 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 SH3BP5LQ7L8J4 393 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 OTOP3Q7RTS5 596 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 ST13P5Q8NFI4 369 aaPredicted RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 GOLGA1Q92805 767 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
SUB1-202ENST00000502453 TTC1Q99614 292 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 YY1AP1Q9H869 796 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 PCDHB10Q9UN67 800 aa4.42□□□□□ -1.7
SUB1-202ENST00000502453 IPO8O15397 1037 aaKnown RBP4.41□□□□□ -1.7
SUB1-202ENST00000502453 COQ9O75208 318 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms