RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 LOC285556D6RIA3 1793 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 POTEFA5A3E0 1075 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 MBD4O95243 580 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 MYCP01106 439 aaPredicted RBP19.48■□□□□ 0.71
NR1H3-227ENST00000498548 GH2P01242 217 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 CYP2D6P10635 497 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 OSBPP22059 807 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 MTMR2Q13614 643 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
NR1H3-227ENST00000498548 WDR18Q9BV38 432 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 TBC1D2Q9BYX2 928 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 SERPINB13Q9UIV8 391 aa19.48■□□□□ 0.71
NR1H3-227ENST00000498548 SH3D19Q5HYK7 790 aa19.47■□□□□ 0.71
NR1H3-227ENST00000498548 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
NR1H3-227ENST00000498548 SMCR8Q8TEV9 937 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-227ENST00000498548 SH3TC2Q8TF17 1288 aa19.47■□□□□ 0.71
NR1H3-227ENST00000498548 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.47■□□□□ 0.71
NR1H3-227ENST00000498548 BAZ2AQ9UIF9 1905 aaKnown RBP19.47■□□□□ 0.71
NR1H3-227ENST00000498548 DDX60LQ5H9U9 1706 aaKnown RBP19.46■□□□□ 0.71
NR1H3-227ENST00000498548 BACE1P56817 501 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 CERKLQ49MI3 558 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-227ENST00000498548 SLC9C1Q4G0N8 1177 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 ANKRD13CQ8N6S4 541 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 OTUD7AQ8TE49 926 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-227ENST00000498548 ARMC5Q96C12 935 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 EHD4Q9H223 541 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-227ENST00000498548 SRRDQ9UH36 339 aa19.46■□□□□ 0.71
NR1H3-227ENST00000498548 USP17L10C9JJH3 530 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 SHMT1P34896 483 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 ZYXQ15942 572 aaKnown RBP19.45■□□□□ 0.7
NR1H3-227ENST00000498548 PUS7LQ9H0K6 701 aaKnown RBP19.45■□□□□ 0.7
NR1H3-227ENST00000498548 ASCC2Q9H1I8 757 aaPredicted RBP19.45■□□□□ 0.7
NR1H3-227ENST00000498548 TMOD4Q9NZQ9 345 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 GABRQQ9UN88 632 aa19.45■□□□□ 0.7
NR1H3-227ENST00000498548 GNRH1P01148 92 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 HOXD10P28358 340 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 FCGRTP55899 365 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 DYNLL2Q96FJ2 89 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 ZNF333Q96JL9 665 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 GINM1Q9NU53 330 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 PNMA3Q9UL41 463 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 MYPNQ86TC9 1320 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 DOCK3Q8IZD9 2030 aa19.44■□□□□ 0.7
NR1H3-227ENST00000498548 CYP2D7A0A087X1C5 515 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 PEX10O60683 326 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 PRKCZQ05513 592 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 GABPAQ06546 454 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
NR1H3-227ENST00000498548 ZSCAN25Q6NSZ9 544 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 NBPF11Q86T75 865 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 SLC44A5Q8NCS7 719 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 RAET1EQ8TD07 263 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 EMILIN3Q9NT22 766 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
NR1H3-227ENST00000498548 HTTP42858 3142 aa19.42■□□□□ 0.7
NR1H3-227ENST00000498548 EN2P19622 333 aaPredicted RBP19.42■□□□□ 0.7
NR1H3-227ENST00000498548 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
NR1H3-227ENST00000498548 PRMT2P55345 433 aa19.42■□□□□ 0.7
NR1H3-227ENST00000498548 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
NR1H3-227ENST00000498548 P2RX7Q99572 595 aaKnown RBP19.42■□□□□ 0.7
NR1H3-227ENST00000498548 CABP5Q9NP86 173 aa19.42■□□□□ 0.7
NR1H3-227ENST00000498548 MPHOSPH10O00566 681 aaKnown RBP19.41■□□□□ 0.7
NR1H3-227ENST00000498548 SEPT2Q15019 361 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 USP17L2Q6R6M4 530 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 TMEM106CQ9BVX2 250 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 ATP8A2Q9NTI2 1148 aa19.41■□□□□ 0.7
NR1H3-227ENST00000498548 USP17L12C9JPN9 530 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 USP17L21D6R901 530 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 TNPO2O14787 897 aaKnown RBP19.4■□□□□ 0.7
NR1H3-227ENST00000498548 IRX3P78415 501 aaPredicted RBP19.4■□□□□ 0.7
NR1H3-227ENST00000498548 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 FEZ1Q99689 392 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 MYH8P13535 1937 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 CENPFP49454 3210 aa19.4■□□□□ 0.7
NR1H3-227ENST00000498548 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
NR1H3-227ENST00000498548 HOXA7P31268 230 aaPredicted RBP19.39■□□□□ 0.69
NR1H3-227ENST00000498548 GRK4P32298 578 aa19.39■□□□□ 0.69
NR1H3-227ENST00000498548 GCLCP48506 637 aaPredicted RBP19.39■□□□□ 0.69
NR1H3-227ENST00000498548 MTFR1Q15390 333 aa19.39■□□□□ 0.69
NR1H3-227ENST00000498548 FAM110CQ1W6H9 321 aa19.39■□□□□ 0.69
NR1H3-227ENST00000498548 PI4K2BQ8TCG2 481 aa19.39■□□□□ 0.69
NR1H3-227ENST00000498548 FLT3LGP49771 235 aa19.38■□□□□ 0.69
NR1H3-227ENST00000498548 KIAA0100Q14667 2235 aaKnown RBP19.38■□□□□ 0.69
NR1H3-227ENST00000498548 C12orf60Q5U649 245 aa19.38■□□□□ 0.69
NR1H3-227ENST00000498548 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
NR1H3-227ENST00000498548 STRBPQ96SI9 672 aaKnown RBP19.38■□□□□ 0.69
NR1H3-227ENST00000498548 BIN2Q9UBW5 565 aaPredicted RBP19.38■□□□□ 0.69
NR1H3-227ENST00000498548 TAOK2Q9UL54 1235 aa19.38■□□□□ 0.69
NR1H3-227ENST00000498548 RBBP6Q7Z6E9 1792 aaKnown RBP19.37■□□□□ 0.69
NR1H3-227ENST00000498548 TTC41PQ6P2S7 1318 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 547.7 ms