RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
THBS3-209ENST00000498500 GPRC5AQ8NFJ5 357 aa14.8□□□□□ -0.04
THBS3-209ENST00000498500 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
THBS3-209ENST00000498500 P2RX7Q99572 595 aaKnown RBP14.8□□□□□ -0.04
THBS3-209ENST00000498500 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
THBS3-209ENST00000498500 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
THBS3-209ENST00000498500 A0A1B0GUL7 405 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 COL2A1P02458 1487 aaPredicted RBP14.79□□□□□ -0.04
THBS3-209ENST00000498500 COL6A1P12109 1028 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 BACE1P56817 501 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 HERVK_113P62684 666 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
THBS3-209ENST00000498500 POLA2Q14181 598 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 MVPQ14764 893 aaKnown RBP14.79□□□□□ -0.04
THBS3-209ENST00000498500 LRRC26Q2I0M4 334 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 RAI14Q9P0K7 980 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 HERC5Q9UII4 1024 aaKnown RBP14.79□□□□□ -0.04
THBS3-209ENST00000498500 AKAP2Q9Y2D5 859 aa14.79□□□□□ -0.04
THBS3-209ENST00000498500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.79□□□□□ -0.04
THBS3-209ENST00000498500 CDK5RAP2Q96SN8 1893 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 CCND3P30281 292 aaPredicted RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 MAPK4P31152 587 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 RGS2P41220 211 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 ZNF384Q8TF68 577 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 NSUN4Q96CB9 384 aaKnown RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 NEUROD6Q96NK8 337 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 LBHD1Q9BQE6 289 aaPredicted RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 NOL10Q9BSC4 688 aaKnown RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 CWC22Q9HCG8 908 aaKnown RBP14.78□□□□□ -0.04
THBS3-209ENST00000498500 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 SIPA1L1O43166 1804 aa14.78□□□□□ -0.04
THBS3-209ENST00000498500 ASNSP08243 561 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 TFCP2Q12800 502 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 CCL14Q16627 93 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 GORABQ5T7V8 394 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 LHX8Q68G74 356 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 PAGR1Q9BTK6 254 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 TRIM34Q9BYJ4 488 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 HMG20BQ9P0W2 317 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 PI4KBQ9UBF8 816 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 DNAH12Q6ZR08 3092 aa14.77□□□□□ -0.05
THBS3-209ENST00000498500 MAST2Q6P0Q8 1798 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 C19orf81C9J6K1 198 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 ERVK-24P63145 666 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 Q3C1V9 767 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 FAM109BQ6ICB4 259 aaPredicted RBP14.76□□□□□ -0.05
THBS3-209ENST00000498500 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 GPR142Q7Z601 462 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 PLEKHH3Q7Z736 793 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 SPATA5Q8NB90 893 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 GUCD1Q96NT3 240 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
THBS3-209ENST00000498500 PORCNQ9H237 461 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 RBPJLQ9UBG7 517 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 FOCADQ5VW36 1801 aa14.76□□□□□ -0.05
THBS3-209ENST00000498500 CRACR2BQ8N4Y2 399 aaPredicted RBP14.75□□□□□ -0.05
THBS3-209ENST00000498500 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
THBS3-209ENST00000498500 USP6NLQ92738 828 aa14.75□□□□□ -0.05
THBS3-209ENST00000498500 APBA2Q99767 749 aa14.75□□□□□ -0.05
THBS3-209ENST00000498500 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
THBS3-209ENST00000498500 LRP2BPQ9P2M1 347 aa14.75□□□□□ -0.05
THBS3-209ENST00000498500 PRKAG2Q9UGJ0 569 aa14.75□□□□□ -0.05
THBS3-209ENST00000498500 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
THBS3-209ENST00000498500 ATP8B2P98198 1209 aa14.74□□□□□ -0.05
THBS3-209ENST00000498500 MORN1Q5T089 497 aa14.74□□□□□ -0.05
THBS3-209ENST00000498500 ZNF697Q5TEC3 545 aa14.74□□□□□ -0.05
THBS3-209ENST00000498500 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
THBS3-209ENST00000498500 GTF3C2Q8WUA4 911 aaPredicted RBP14.74□□□□□ -0.05
THBS3-209ENST00000498500 MYO5AQ9Y4I1 1855 aaKnown RBP14.74□□□□□ -0.05
THBS3-209ENST00000498500 MYH1P12882 1939 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 GDF11O95390 407 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 BAG3O95817 575 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 MS4A1P11836 297 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 CNGA1P29973 690 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 ATN1P54259 1190 aaPredicted RBP14.73□□□□□ -0.05
THBS3-209ENST00000498500 JAG1P78504 1218 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 C20orf194Q5TEA3 1177 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 WDR78Q5VTH9 848 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 FOXP4Q8IVH2 680 aaPredicted RBP14.73□□□□□ -0.05
THBS3-209ENST00000498500 EDC3Q96F86 508 aaKnown RBP14.73□□□□□ -0.05
THBS3-209ENST00000498500 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
THBS3-209ENST00000498500 COG6Q9Y2V7 657 aa14.73□□□□□ -0.05
THBS3-209ENST00000498500 LTBP2Q14767 1821 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
THBS3-209ENST00000498500 PLCG2P16885 1265 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 MAP2K5Q13163 448 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 NAA16Q6N069 864 aaPredicted RBP14.72□□□□□ -0.05
THBS3-209ENST00000498500 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 TGFBRAP1Q8WUH2 860 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 GINM1Q9NU53 330 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms