RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 OSBPL3Q9H4L5 887 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
C4A-259ENST00000498271 PTH1RQ03431 593 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 EDC3Q96F86 508 aaKnown RBP16.8■□□□□ 0.28
C4A-259ENST00000498271 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 KCNH3Q9ULD8 1083 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 CAPN7Q9Y6W3 813 aa16.8■□□□□ 0.28
C4A-259ENST00000498271 APBA1Q02410 837 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 ME3Q16798 604 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 LRCH2Q5VUJ6 765 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 B4E1Z4 1266 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 DDX17Q92841 729 aaKnown RBP16.79■□□□□ 0.28
C4A-259ENST00000498271 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 GPAA1O43292 621 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 SH2D4BQ5SQS7 431 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 SEL1L2Q5TEA6 688 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 AP1ARQ63HQ0 302 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 LUC7L3O95232 432 aaKnown RBP16.79■□□□□ 0.28
C4A-259ENST00000498271 PHLDB2Q86SQ0 1253 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
C4A-259ENST00000498271 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
C4A-259ENST00000498271 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 PPP1R7Q15435 360 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 RABGGTAQ92696 567 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 ZKSCAN3Q9BRR0 538 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
C4A-259ENST00000498271 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 PNMA8AQ86V59 439 aaPredicted RBP16.78■□□□□ 0.28
C4A-259ENST00000498271 LRRC8AQ8IWT6 810 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 USH1CQ9Y6N9 552 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 CD2BP2O95400 341 aaKnown RBP16.78■□□□□ 0.28
C4A-259ENST00000498271 GCKP35557 465 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 RASSF2P50749 326 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 CFAP221Q4G0U5 840 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.284e-10■■■■□ 21.5
C4A-259ENST00000498271 GAS2L3Q86XJ1 694 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
C4A-259ENST00000498271 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 JAK2O60674 1132 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 PHKG2P15735 406 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 TBC1D8BQ0IIM8 1120 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
C4A-259ENST00000498271 RNF10Q8N5U6 811 aaKnown RBP16.77■□□□□ 0.28
C4A-259ENST00000498271 SMIM23A6NLE4 172 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
C4A-259ENST00000498271 RRP15Q9Y3B9 282 aaKnown RBP16.77■□□□□ 0.28
C4A-259ENST00000498271 TSC1Q92574 1164 aa16.77■□□□□ 0.27
C4A-259ENST00000498271 CSRNP2Q9H175 543 aa16.77■□□□□ 0.27
C4A-259ENST00000498271 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.27
C4A-259ENST00000498271 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.27
C4A-259ENST00000498271 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.27
C4A-259ENST00000498271 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
C4A-259ENST00000498271 E7EVH7 732 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 ZNF202O95125 648 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 CAPS2Q9BXY5 557 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 RGS12O14924 1447 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 PDE8AO60658 829 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 PDE6BP35913 854 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 PLCD1P51178 756 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 GNGT1P63211 74 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 KRT79Q5XKE5 535 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 RPAINQ86UA6 219 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 VSIG1Q86XK7 387 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 RAB3IPQ96QF0 476 aaPredicted RBP16.76■□□□□ 0.27
C4A-259ENST00000498271 NOC4LQ9BVI4 516 aaKnown RBP16.76■□□□□ 0.27
C4A-259ENST00000498271 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 DTHD1Q6ZMT9 781 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
C4A-259ENST00000498271 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 PPP1R12CQ9BZL4 782 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
C4A-259ENST00000498271 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 SAR1BQ9Y6B6 198 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 GLI2P10070 1586 aa16.76■□□□□ 0.27
C4A-259ENST00000498271 DSCC1Q9BVC3 393 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 BAIAP2L1Q9UHR4 511 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 CTNND2Q9UQB3 1225 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 A0A087WUV0 522 aaPredicted RBP16.75■□□□□ 0.27
C4A-259ENST00000498271 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
C4A-259ENST00000498271 OTUD7BQ6GQQ9 843 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 EXOC4Q96A65 974 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 FAM184BQ9ULE4 1060 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 NFE2L3Q9Y4A8 694 aa16.75■□□□□ 0.27
C4A-259ENST00000498271 MAP7D1Q3KQU3 841 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms