RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 MAGED1Q9Y5V3 778 aaPredicted RBP8.62□□□□□ -1.03
NEB-216ENST00000497809 C9IYK1 514 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 PF4V1P10720 104 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 APBA1Q02410 837 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 GRM2Q14416 872 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 SNAP47Q5SQN1 464 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 PKN3Q6P5Z2 889 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 LSRQ86X29 649 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 ZNF713Q8N859 430 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 ZBTB38Q8NAP3 1195 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 GIMAP8Q8ND71 665 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 HVCN1Q96D96 273 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 CLIP3Q96DZ5 547 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 FERD3LQ96RJ6 166 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 DHRS4Q9BTZ2 278 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 PUS7LQ9H0K6 701 aaKnown RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 MRGBPQ9NV56 204 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 ABCF2Q9UG63 623 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 NUDT7P0C024 238 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 UBA7P41226 1012 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 PIK3CAP42336 1068 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 ALDH5A1P51649 535 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 TBX2Q13207 712 aaPredicted RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
NEB-216ENST00000497809 SH3PXD2AQ5TCZ1 1133 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
NEB-216ENST00000497809 STAG2Q8N3U4 1231 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 TNIP3Q96KP6 325 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
NEB-216ENST00000497809 BACH1O14867 736 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 HMMRO75330 724 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 BAIAP3O94812 1187 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 CAMK2GQ13555 558 aaPredicted RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 SEPT7Q16181 437 aaKnown RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 GPATCH4Q5T3I0 446 aaKnown RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 GPR158Q5T848 1215 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 HEATR6Q6AI08 1181 aaKnown RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 FAM178BQ8IXR5 827 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 RPGRQ92834 1020 aaKnown RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 TBATAQ96M53 351 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 MAN1C1Q9NR34 630 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 LRRC4BQ9NT99 713 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 SAP30BPQ9UHR5 308 aaKnown RBP8.6□□□□□ -1.03
NEB-216ENST00000497809 ODF2LQ9ULJ1 636 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 GPR52Q9Y2T5 361 aa8.6□□□□□ -1.03
NEB-216ENST00000497809 FBXO21O94952 628 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 ASGR2P07307 311 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 ID4P47928 161 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 RUFY4Q6ZNE9 571 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 TBC1D1Q86TI0 1168 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 TTC30AQ86WT1 665 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 CCDC34Q96HJ3 373 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 RRN3Q9NYV6 651 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 USP3Q9Y6I4 520 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 SLC4A7Q9Y6M7 1214 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 A0A087WZG4 1122 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 MBD4O95243 580 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 MYCP01106 439 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 IFIT1P09914 478 aaKnown RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 GSTT1P30711 240 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 CCT5P48643 541 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 ADCY1Q08828 1119 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 SLC41A1Q8IVJ1 513 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 FAM26EQ8N5C1 309 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 KCT2Q8NC54 265 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 DDX1Q92499 740 aaKnown RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 ZNF669Q96BR6 464 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 SLC26A8Q96RN1 970 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 CRB3Q9BUF7 120 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
NEB-216ENST00000497809 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
NEB-216ENST00000497809 UPK3BL1B0FP48 263 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 UPK3BL2E5RIL1 263 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 K7ENM7 598 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 TOR1BO14657 336 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
NEB-216ENST00000497809 VAMP4O75379 141 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 PCSK2P16519 638 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 MCM4P33991 863 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 RGS3P49796 1198 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 RAB15P59190 212 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 ROR1Q01973 937 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 GRM1Q13255 1194 aa8.58□□□□□ -1.04
NEB-216ENST00000497809 ZCCHC8Q6NZY4 707 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms