RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 C19orf81C9J6K1 198 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 CYP2E1P05181 493 aaPredicted RBP26.71■■□□□ 1.87
CLIC4-204ENST00000497755 PLCG2P16885 1265 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 CYP2B6P20813 491 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 FRAT1Q92837 279 aaPredicted RBP26.71■■□□□ 1.87
CLIC4-204ENST00000497755 CLUAP1Q96AJ1 413 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 DBNDD2Q9BQY9 259 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 PALD1Q9ULE6 856 aa26.71■■□□□ 1.87
CLIC4-204ENST00000497755 FLT1P17948 1338 aa26.7■■□□□ 1.87
CLIC4-204ENST00000497755 BMP8BP34820 402 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 HERVK_113P62684 666 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 TNNI3KQ59H18 835 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 TTC39AQ5SRH9 613 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 MAP3K21Q5TCX8 1036 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 C7orf61Q8IZ16 206 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 GPRC5AQ8NFJ5 357 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 RBPJLQ9UBG7 517 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 OGDHLQ9ULD0 1010 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 FPGT-TNNI3KV9GXZ4 949 aa26.7■■□□□ 1.86
CLIC4-204ENST00000497755 USP17L10C9JJH3 530 aa26.69■■□□□ 1.86
CLIC4-204ENST00000497755 POLA2Q14181 598 aa26.69■■□□□ 1.86
CLIC4-204ENST00000497755 Q3C1V9 767 aa26.69■■□□□ 1.86
CLIC4-204ENST00000497755 CCDC158Q5M9N0 1113 aa26.69■■□□□ 1.86
CLIC4-204ENST00000497755 CDK5RAP2Q96SN8 1893 aa26.69■■□□□ 1.86
CLIC4-204ENST00000497755 ZMYND8Q9ULU4 1186 aaPredicted RBP26.69■■□□□ 1.86
CLIC4-204ENST00000497755 MYO5AQ9Y4I1 1855 aaKnown RBP26.68■■□□□ 1.86
CLIC4-204ENST00000497755 GDF11O95390 407 aa26.68■■□□□ 1.86
CLIC4-204ENST00000497755 XRCC5P13010 732 aaKnown RBP26.68■■□□□ 1.86
CLIC4-204ENST00000497755 POTEEQ6S8J3 1075 aa26.68■■□□□ 1.86
CLIC4-204ENST00000497755 NUDT12Q9BQG2 462 aa26.68■■□□□ 1.86
CLIC4-204ENST00000497755 C11orf49Q9H6J7 331 aa26.68■■□□□ 1.86
CLIC4-204ENST00000497755 GINM1Q9NU53 330 aa26.68■■□□□ 1.86
CLIC4-204ENST00000497755 CRACR2BQ8N4Y2 399 aaPredicted RBP26.67■■□□□ 1.86
CLIC4-204ENST00000497755 ZNF512BQ96KM6 892 aaPredicted RBP26.67■■□□□ 1.86
CLIC4-204ENST00000497755 ZBTB21Q9ULJ3 1066 aa26.67■■□□□ 1.86
CLIC4-204ENST00000497755 PRKAR2AP13861 404 aaKnown RBP26.66■■□□□ 1.86
CLIC4-204ENST00000497755 ZAP70P43403 619 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 ATP8B2P98198 1209 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 TMEM57Q8N5G2 664 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 SSH3Q8TE77 659 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 USP6NLQ92738 828 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 TRIM34Q9BYJ4 488 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 PIH1D3Q9NQM4 214 aaKnown RBP26.66■■□□□ 1.86
CLIC4-204ENST00000497755 EMILIN3Q9NT22 766 aa26.66■■□□□ 1.86
CLIC4-204ENST00000497755 SAP30BPQ9UHR5 308 aaKnown RBP26.66■■□□□ 1.86
CLIC4-204ENST00000497755 FOCADQ5VW36 1801 aa26.65■■□□□ 1.86
CLIC4-204ENST00000497755 SLC17A8Q8NDX2 589 aa26.65■■□□□ 1.86
CLIC4-204ENST00000497755 SOCS4Q8WXH5 440 aa26.65■■□□□ 1.86
CLIC4-204ENST00000497755 DDX60LQ5H9U9 1706 aaKnown RBP26.65■■□□□ 1.86
CLIC4-204ENST00000497755 IGSF3O75054 1194 aa26.64■■□□□ 1.86
CLIC4-204ENST00000497755 MAPK4P31152 587 aa26.64■■□□□ 1.86
CLIC4-204ENST00000497755 ERVK-9P63128 1117 aa26.64■■□□□ 1.86
CLIC4-204ENST00000497755 ERVK-24P63145 666 aa26.64■■□□□ 1.86
CLIC4-204ENST00000497755 DYNLL1P63167 89 aaKnown RBP26.64■■□□□ 1.86
CLIC4-204ENST00000497755 PORCNQ9H237 461 aa26.64■■□□□ 1.86
CLIC4-204ENST00000497755 SURF6O75683 361 aaKnown RBP26.63■■□□□ 1.85
CLIC4-204ENST00000497755 SYN1P17600 705 aa26.63■■□□□ 1.85
CLIC4-204ENST00000497755 CACNB2Q08289 660 aaPredicted RBP26.63■■□□□ 1.85
CLIC4-204ENST00000497755 OS9Q13438 667 aaPredicted RBP26.63■■□□□ 1.85
CLIC4-204ENST00000497755 MAST2Q6P0Q8 1798 aa26.63■■□□□ 1.85
CLIC4-204ENST00000497755 HLA-DOAP06340 250 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 PDE3AQ14432 1141 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 MORN1Q5T089 497 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 USP17L2Q6R6M4 530 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 GPR142Q7Z601 462 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 TRMT44Q8IYL2 757 aaKnown RBP26.62■■□□□ 1.85
CLIC4-204ENST00000497755 PFASO15067 1338 aa26.62■■□□□ 1.85
CLIC4-204ENST00000497755 CCER2I3L3R5 266 aa26.61■■□□□ 1.85
CLIC4-204ENST00000497755 CYP7A1P22680 504 aa26.61■■□□□ 1.85
CLIC4-204ENST00000497755 MAGEA10P43363 369 aaPredicted RBP26.61■■□□□ 1.85
CLIC4-204ENST00000497755 CCL14Q16627 93 aa26.61■■□□□ 1.85
CLIC4-204ENST00000497755 LHX8Q68G74 356 aa26.61■■□□□ 1.85
CLIC4-204ENST00000497755 GTF3C2Q8WUA4 911 aaPredicted RBP26.61■■□□□ 1.85
CLIC4-204ENST00000497755 PAGR1Q9BTK6 254 aa26.61■■□□□ 1.85
CLIC4-204ENST00000497755 DBNLQ9UJU6 430 aaKnown RBP26.61■■□□□ 1.85
CLIC4-204ENST00000497755 GH2P01242 217 aa26.6■■□□□ 1.85
CLIC4-204ENST00000497755 COL6A1P12109 1028 aa26.6■■□□□ 1.85
CLIC4-204ENST00000497755 ZKSCAN1P17029 563 aaPredicted RBP26.6■■□□□ 1.85
CLIC4-204ENST00000497755 GPR153Q6NV75 609 aa26.6■■□□□ 1.85
CLIC4-204ENST00000497755 PLEKHH3Q7Z736 793 aa26.6■■□□□ 1.85
CLIC4-204ENST00000497755 CCAR1Q8IX12 1150 aaKnown RBP26.6■■□□□ 1.85
CLIC4-204ENST00000497755 TLR7Q9NYK1 1049 aaKnown RBP26.6■■□□□ 1.85
CLIC4-204ENST00000497755 NOP58Q9Y2X3 529 aaKnown RBP26.6■■□□□ 1.85
CLIC4-204ENST00000497755 CCND3P30281 292 aaPredicted RBP26.59■■□□□ 1.85
CLIC4-204ENST00000497755 RGS2P41220 211 aa26.59■■□□□ 1.85
CLIC4-204ENST00000497755 ZKSCAN2Q63HK3 967 aa26.59■■□□□ 1.85
CLIC4-204ENST00000497755 TATDN1Q6P1N9 297 aa26.59■■□□□ 1.85
CLIC4-204ENST00000497755 CCDC8Q9H0W5 538 aaPredicted RBP26.59■■□□□ 1.85
CLIC4-204ENST00000497755 C1orf115Q9H7X2 142 aa26.59■■□□□ 1.85
CLIC4-204ENST00000497755 DNAH12Q6ZR08 3092 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 DLL1O00548 723 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 CNMDO75829 334 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 LRIT3Q3SXY7 679 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 MIGA1Q8NAN2 632 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 EAF2Q96CJ1 260 aaPredicted RBP26.58■■□□□ 1.85
CLIC4-204ENST00000497755 C12orf42Q96LP6 360 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 MYH1P12882 1939 aa26.58■■□□□ 1.85
CLIC4-204ENST00000497755 RABGAP1Q9Y3P9 1069 aa26.57■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L15C9J2P7 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L13C9JLJ4 530 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms