RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 GATA4P43694 442 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 PPP2R5EQ16537 467 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 PAOXQ6QHF9 649 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 CD163Q86VB7 1156 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 LSRQ86X29 649 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-221ENST00000497703 PHACTR4Q8IZ21 702 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 MEGF10Q96KG7 1140 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 SLC12A7Q9Y666 1083 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 FAM95CA0A1B0GW59 222 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 SLC22A31A6NKX4 558 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 NTF4P34130 210 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 SGO2Q562F6 1265 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 OVOS1Q6IE37 1185 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 CDPF1Q6NVV7 123 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 ANKS3Q6ZW76 656 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 FAM20CQ8IXL6 584 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 GIMAP7Q8NHV1 300 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
GARNL3-221ENST00000497703 NFICP08651 508 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 CAP2P40123 477 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 RASSF7Q02833 373 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 RBL2Q08999 1139 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 KCNMA1Q12791 1236 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 ARSHQ5FYA8 562 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 SLFN12Q8IYM2 578 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 MFSD2AQ8NA29 543 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 FOXQ1Q9C009 403 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 SEMA6CQ9H3T2 930 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
GARNL3-221ENST00000497703 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
GARNL3-221ENST00000497703 LRIG2O94898 1065 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 GUCY2CP25092 1073 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 CDCP2Q5VXM1 449 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 BEND4Q6ZU67 534 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 TAB3Q8N5C8 712 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-221ENST00000497703 C19orf47Q8N9M1 422 aaKnown RBP10.76□□□□□ -0.69
GARNL3-221ENST00000497703 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-221ENST00000497703 ATG4CQ96DT6 458 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 ANTXR1Q9H6X2 564 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 ACTR10Q9NZ32 417 aa10.76□□□□□ -0.69
GARNL3-221ENST00000497703 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 CST3P01034 146 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-221ENST00000497703 NME1P15531 152 aaKnown RBP10.75□□□□□ -0.69
GARNL3-221ENST00000497703 GBP1P32455 592 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 PRAMEF13Q5VWM6 474 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
GARNL3-221ENST00000497703 ARMCX6Q7L4S7 300 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 TP53INP1Q96A56 240 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 CNNM2Q9H8M5 875 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 LGR6Q9HBX8 967 aa10.75□□□□□ -0.69
GARNL3-221ENST00000497703 CHURC1-FNTBB4DL54 471 aa10.74□□□□□ -0.69
GARNL3-221ENST00000497703 SLBPQ14493 270 aaKnown RBP eCLIP10.74□□□□□ -0.69
GARNL3-221ENST00000497703 NKG7Q16617 165 aa10.74□□□□□ -0.69
GARNL3-221ENST00000497703 CLEC10AQ8IUN9 316 aa10.74□□□□□ -0.69
GARNL3-221ENST00000497703 ARMC10Q8N2F6 343 aa10.74□□□□□ -0.69
GARNL3-221ENST00000497703 CCDC74BQ96LY2 380 aa10.74□□□□□ -0.69
GARNL3-221ENST00000497703 DPH2Q9BQC3 489 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-221ENST00000497703 UPK3BL1B0FP48 263 aa10.73□□□□□ -0.69
GARNL3-221ENST00000497703 UPK3BL2E5RIL1 263 aa10.73□□□□□ -0.69
GARNL3-221ENST00000497703 GDF11O95390 407 aa10.73□□□□□ -0.69
GARNL3-221ENST00000497703 CCNFP41002 786 aa10.73□□□□□ -0.69
GARNL3-221ENST00000497703 CASP7P55210 303 aa10.73□□□□□ -0.69
GARNL3-221ENST00000497703 RUFY4Q6ZNE9 571 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 TMEM151AQ8N4L1 468 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 XAGE3Q8WTP9 111 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 CYB5D2Q8WUJ1 264 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 HNRNPLLQ8WVV9 542 aaKnown RBP10.72□□□□□ -0.69
GARNL3-221ENST00000497703 DHRS1Q96LJ7 313 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
GARNL3-221ENST00000497703 TNFRSF10CO14798 259 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 DNAJA2O60884 412 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 FXNQ16595 210 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 ZNF746Q6NUN9 644 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-221ENST00000497703 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 FAM83CQ9BQN1 747 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 RAXQ9Y2V3 346 aa10.71□□□□□ -0.69
GARNL3-221ENST00000497703 RGS13O14921 159 aa10.7□□□□□ -0.7
GARNL3-221ENST00000497703 RAB33AQ14088 237 aa10.7□□□□□ -0.7
GARNL3-221ENST00000497703 LARP1BQ659C4 914 aaKnown RBP10.7□□□□□ -0.7
GARNL3-221ENST00000497703 KIF2CQ99661 725 aa10.7□□□□□ -0.7
GARNL3-221ENST00000497703 SSBP4Q9BWG4 385 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-221ENST00000497703 SIRPGQ9P1W8 387 aa10.7□□□□□ -0.7
GARNL3-221ENST00000497703 DPH6Q7L8W6 267 aa10.69□□□□□ -0.7
GARNL3-221ENST00000497703 MIPEPQ99797 713 aa10.69□□□□□ -0.7
GARNL3-221ENST00000497703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.69□□□□□ -0.7
GARNL3-221ENST00000497703 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
GARNL3-221ENST00000497703 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
GARNL3-221ENST00000497703 A0A1W2PQH9 124 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 CYP7A1P22680 504 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 ETV3P41162 512 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 NFE2L2Q16236 605 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 PLA2G4EQ3MJ16 856 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 BBS9Q3SYG4 887 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms