RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 SWAP70Q9UH65 585 aa19.36■□□□□ 0.69
FAM3A-220ENST00000497506 GDF11O95390 407 aa19.35■□□□□ 0.69
FAM3A-220ENST00000497506 FGAP02671 866 aa19.35■□□□□ 0.69
FAM3A-220ENST00000497506 CDK8P49336 464 aa19.35■□□□□ 0.69
FAM3A-220ENST00000497506 PPIL2Q13356 520 aa19.35■□□□□ 0.69
FAM3A-220ENST00000497506 RUFY2Q8WXA3 655 aa19.35■□□□□ 0.69
FAM3A-220ENST00000497506 ZMYM6O95789 1325 aa19.34■□□□□ 0.69
FAM3A-220ENST00000497506 IRF6O14896 467 aa19.34■□□□□ 0.69
FAM3A-220ENST00000497506 SGSM2O43147 1006 aa19.34■□□□□ 0.69
FAM3A-220ENST00000497506 CERKLQ49MI3 558 aaPredicted RBP19.34■□□□□ 0.69
FAM3A-220ENST00000497506 CCDC84Q86UT8 332 aaPredicted RBP19.34■□□□□ 0.69
FAM3A-220ENST00000497506 MS4A4AQ96JQ5 239 aa19.34■□□□□ 0.69
FAM3A-220ENST00000497506 GINM1Q9NU53 330 aa19.34■□□□□ 0.69
FAM3A-220ENST00000497506 ASNSP08243 561 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 PPARAQ07869 468 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 DSCC1Q9BVC3 393 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 ZBTB21Q9ULJ3 1066 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 KCNH4Q9UQ05 1017 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 AFG3L2Q9Y4W6 797 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 ZHX2Q9Y6X8 837 aa19.33■□□□□ 0.68
FAM3A-220ENST00000497506 PTPRFP10586 1907 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 MANSC4A6NHS7 340 aaPredicted RBP19.32■□□□□ 0.68
FAM3A-220ENST00000497506 GH2P01242 217 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 TM4SF4P48230 202 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 REM2Q8IYK8 340 aaPredicted RBP19.32■□□□□ 0.68
FAM3A-220ENST00000497506 STK11IPQ8N1F8 1099 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
FAM3A-220ENST00000497506 TESPA1A2RU30 521 aaPredicted RBP19.31■□□□□ 0.68
FAM3A-220ENST00000497506 USP17L5A8MUK1 530 aa19.31■□□□□ 0.68
FAM3A-220ENST00000497506 GTF2A2P52657 109 aa19.31■□□□□ 0.68
FAM3A-220ENST00000497506 MAP2K1Q02750 393 aaPredicted RBP19.31■□□□□ 0.68
FAM3A-220ENST00000497506 ESYT1Q9BSJ8 1104 aa19.31■□□□□ 0.68
FAM3A-220ENST00000497506 WBP1LQ9NX94 342 aa19.31■□□□□ 0.68
FAM3A-220ENST00000497506 PCNTO95613 3336 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 CXCL11O14625 94 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 CDC45O75419 566 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 AKR1B1P15121 316 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 RASA1P20936 1047 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 INHBEP58166 350 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 SREBF2Q12772 1141 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 CCDC17Q96LX7 622 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 WDR18Q9BV38 432 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 TACC3Q9Y6A5 838 aa19.3■□□□□ 0.68
FAM3A-220ENST00000497506 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-220ENST00000497506 PTH1RQ03431 593 aa19.29■□□□□ 0.68
FAM3A-220ENST00000497506 BRI3BPQ8WY22 251 aa19.29■□□□□ 0.68
FAM3A-220ENST00000497506 PTPN18Q99952 460 aa19.29■□□□□ 0.68
FAM3A-220ENST00000497506 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
FAM3A-220ENST00000497506 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
FAM3A-220ENST00000497506 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
FAM3A-220ENST00000497506 CCL15-CCL14A0A0B4J2E2 113 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 TRIM75PA6NK02 468 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 MPHOSPH10O00566 681 aaKnown RBP19.28■□□□□ 0.68
FAM3A-220ENST00000497506 PRDM1O75626 825 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 SLC3A2P08195 630 aaKnown RBP19.28■□□□□ 0.68
FAM3A-220ENST00000497506 CETPP11597 493 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 SPP2Q13103 211 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 MOGSQ13724 837 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 SEPT2Q15019 361 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 CCL15Q16663 113 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 NBPF3Q9H094 633 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 MKNK2Q9HBH9 465 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 AS3MTQ9HBK9 375 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 INCENPQ9NQS7 918 aa19.28■□□□□ 0.68
FAM3A-220ENST00000497506 A0A0G2JLL6 359 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-220ENST00000497506 IGF2BP3O00425 579 aaKnown RBP eCLIP19.27■□□□□ 0.68
FAM3A-220ENST00000497506 FGRP09769 529 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 HAND2P61296 217 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 PDE4BQ07343 736 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 RAB3GAP1Q15042 981 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 TMEM179Q6ZVK1 233 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 PRRT2Q7Z6L0 340 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-220ENST00000497506 IFNL1Q8IU54 200 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
FAM3A-220ENST00000497506 ZNF287Q9HBT7 754 aa19.27■□□□□ 0.68
FAM3A-220ENST00000497506 MAP4K1Q92918 833 aa19.26■□□□□ 0.67
FAM3A-220ENST00000497506 LSG1Q9H089 658 aaKnown RBP19.26■□□□□ 0.67
FAM3A-220ENST00000497506 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
FAM3A-220ENST00000497506 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
FAM3A-220ENST00000497506 LOC285556D6RIA3 1793 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 ZNF213O14771 459 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 ORC4O43929 436 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 HSPA1AP0DMV8 641 aaKnown RBP19.25■□□□□ 0.67
FAM3A-220ENST00000497506 HSPA1BP0DMV9 641 aaKnown RBP19.25■□□□□ 0.67
FAM3A-220ENST00000497506 SH3D19Q5HYK7 790 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 CASC1Q6TDU7 716 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 SIAH1Q8IUQ4 282 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 TBC1D10CQ8IV04 446 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 ZNF444Q8N0Y2 327 aaPredicted RBP19.25■□□□□ 0.67
FAM3A-220ENST00000497506 ACER1Q8TDN7 264 aa19.25■□□□□ 0.67
FAM3A-220ENST00000497506 BTBD19C9JJ37 291 aa19.24■□□□□ 0.67
FAM3A-220ENST00000497506 BACE1P56817 501 aa19.24■□□□□ 0.67
FAM3A-220ENST00000497506 IMMTQ16891 758 aaKnown RBP19.24■□□□□ 0.67
FAM3A-220ENST00000497506 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms