RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 LAMB1P07942 1786 aa12.35□□□□□ -0.43
USP13-205ENST00000497380 B4E1Z4 1266 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 KDM4AO75164 1064 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 RPS6KB1P23443 525 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 NEK4P51957 841 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
USP13-205ENST00000497380 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 NEDD4P46934 1319 aa12.34□□□□□ -0.43
USP13-205ENST00000497380 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 PRC1O43663 620 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 PRDM1O75626 825 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 RASA1P20936 1047 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 SHMT1P34896 483 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 MCM2P49736 904 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 HTRA3P83110 453 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 TFAP4Q01664 338 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 MAP1SQ66K74 1059 aaPredicted RBP12.33□□□□□ -0.44
USP13-205ENST00000497380 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
USP13-205ENST00000497380 NEDD1Q8NHV4 660 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 KIF2CQ99661 725 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 GLIS2Q9BZE0 524 aaPredicted RBP12.33□□□□□ -0.44
USP13-205ENST00000497380 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
USP13-205ENST00000497380 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 TCP11L1Q9NUJ3 509 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 TAF6LQ9Y6J9 622 aa12.33□□□□□ -0.44
USP13-205ENST00000497380 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 MPHOSPH10O00566 681 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 FKBP1BP68106 108 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 MIGA2Q7L4E1 593 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 TTC14Q96N46 770 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 INCENPQ9NQS7 918 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
USP13-205ENST00000497380 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
USP13-205ENST00000497380 SMIM22K7EJ46 135 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 ASNSP08243 561 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
USP13-205ENST00000497380 CAP2P40123 477 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 EVX2Q03828 476 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 FAM47AQ5JRC9 791 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 PRAMEF18Q5VWM3 479 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
USP13-205ENST00000497380 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 KANSL2Q9H9L4 492 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
USP13-205ENST00000497380 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 FAM196BA6NMK8 535 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
USP13-205ENST00000497380 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
USP13-205ENST00000497380 LIFRP42702 1097 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
USP13-205ENST00000497380 WTAPQ15007 396 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 CYB5R4Q7L1T6 521 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
USP13-205ENST00000497380 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
USP13-205ENST00000497380 USP2O75604 605 aaPredicted RBP12.29□□□□□ -0.44
USP13-205ENST00000497380 TTLL1O95922 423 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 AKR1B1P15121 316 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 BECN1Q14457 450 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
USP13-205ENST00000497380 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 Q6ZUG5 572 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 ANKRD13AQ8IZ07 590 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
USP13-205ENST00000497380 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 AGXT2Q9BYV1 514 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 SH2D4AQ9H788 454 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 AS3MTQ9HBK9 375 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms