RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CPS1P31327 1500 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 SETD1BQ9UPS6 1966 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 CFTRP13569 1480 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 VSTM5A8MXK1 200 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 K7ESF4 209 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 KHNYNO15037 678 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 PIP5K1CO60331 668 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 XYLBO75191 536 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 NPTXRO95502 500 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 APBA3O96018 575 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ADH1CP00326 375 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 LDHCP07864 332 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ACRP10323 421 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ARAFP10398 606 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 HOXD8P13378 290 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 ACPPP15309 386 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZSCAN20P17040 1043 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 BPIP17213 487 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 TYRP1P17643 537 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 GUCY2CP25092 1073 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 RXRBP28702 533 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 L1CAMP32004 1257 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PTGIRP43119 386 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PLA2G4AP47712 749 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 GRIA4P48058 902 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 TRAPPC10P48553 1259 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 RPIAP49247 311 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PTPN5P54829 565 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 MAP7Q14244 749 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 MYBPC2Q14324 1141 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 NCAPHQ15003 741 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZYXQ15942 572 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 INAVAQ3KP66 663 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 CCDC184Q52MB2 194 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 C4orf17Q53FE4 359 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 RPS26P11Q5JNZ5 115 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 TJAP1Q5JTD0 557 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PLA2G2CQ5R387 149 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 AXDND1Q5T1B0 1012 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 WDR78Q5VTH9 848 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 RNF219Q5W0B1 726 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 FBXW10Q5XX13 1052 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZNF772Q68DY9 489 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZNF280DQ6N043 979 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 SLC4A10Q6U841 1118 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 DTHD1Q6ZMT9 781 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 LRRC69Q6ZNQ3 347 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 MORC1Q86VD1 984 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 NLRP13Q86W25 1043 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 SPATS2Q86XZ4 545 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 PASD1Q8IV76 773 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 CMTR1Q8N1G2 835 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 PPM1KQ8N3J5 372 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 TEX19Q8NA77 164 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ANKLE1Q8NAG6 615 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 WDR66Q8TBY9 1149 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 USP33Q8TEY7 942 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 COG1Q8WTW3 980 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 JPH3Q8WXH2 748 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 KLHL6Q8WZ60 621 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZNF516Q92618 1163 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 GJA10Q969M2 543 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PMEPA1Q969W9 287 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 NLRP3Q96P20 1036 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 TM9SF2Q99805 663 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 BHLHE41Q9C0J9 482 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 EPN3Q9H201 632 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZNF576Q9H609 170 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ANTXR1Q9H6X2 564 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 LIN7BQ9HAP6 207 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 AS3MTQ9HBK9 375 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 C11orf16Q9NQ32 467 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 SEC31BQ9NQW1 1179 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 DDX21Q9NR30 783 aaKnown RBP eCLIP2.42□□□□□ -2.02
UBR4-217ENST00000497018 SAGE1Q9NXZ1 904 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 KANSL3Q9P2N6 904 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PGAP2Q9UHJ9 254 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 GTF2IRD1Q9UHL9 959 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ZNF180Q9UJW8 692 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 RNF17Q9BXT8 1623 aaKnown RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 FANCAO15360 1455 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 TDRD9Q8NDG6 1382 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 GOLGA6CA6NDK9 693 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 GOLGA6BA6NDN3 693 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 RASSF10A6NK89 507 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 APAF1O14727 1248 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 MYL3P08590 195 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 IFIT2P09913 472 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 C6orf222P0C671 652 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 GOLGA6DP0CG33 693 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PHKG2P15735 406 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 BMP6P22004 513 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 LPOP22079 712 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 CES1P23141 567 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 MCM4P33991 863 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 CCNFP41002 786 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 ECE1P42892 770 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 SARSP49591 514 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 GJA9P57773 515 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 POU5F1Q01860 360 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms