RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
SRSF4-205ENST00000497015 SYMPKQ92797 1274 aaKnown RBP12.18□□□□□ -0.46
SRSF4-205ENST00000497015 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
SRSF4-205ENST00000497015 AK9Q5TCS8 1911 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
SRSF4-205ENST00000497015 JAG1P78504 1218 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 SH3D19Q5HYK7 790 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 MORN1Q5T089 497 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 PORCNQ9H237 461 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 HDAC5Q9UQL6 1122 aa12.17□□□□□ -0.46
SRSF4-205ENST00000497015 TTC28Q96AY4 2481 aa12.16□□□□□ -0.46
SRSF4-205ENST00000497015 TBC1D12O60347 775 aa12.16□□□□□ -0.46
SRSF4-205ENST00000497015 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
SRSF4-205ENST00000497015 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
SRSF4-205ENST00000497015 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
SRSF4-205ENST00000497015 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
SRSF4-205ENST00000497015 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
SRSF4-205ENST00000497015 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
SRSF4-205ENST00000497015 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
SRSF4-205ENST00000497015 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
SRSF4-205ENST00000497015 GAKO14976 1311 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 IFIT1P09914 478 aaKnown RBP12.15□□□□□ -0.46
SRSF4-205ENST00000497015 PLA2G5P39877 138 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 RHBDL3P58872 404 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 SMAD3P84022 425 aaKnown RBP12.15□□□□□ -0.46
SRSF4-205ENST00000497015 GRIN2CQ14957 1233 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 PUM3Q15397 648 aaKnown RBP12.15□□□□□ -0.46
SRSF4-205ENST00000497015 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 ZNF384Q8TF68 577 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 BADQ92934 168 aa12.15□□□□□ -0.46
SRSF4-205ENST00000497015 SALL1Q9NSC2 1324 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 IGHA2P01877 340 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 FOSL2P15408 326 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 ITGB8P26012 769 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-205ENST00000497015 EPHB4P54760 987 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 RTP1P59025 263 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 PICALMQ13492 652 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-205ENST00000497015 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 LPIN2Q92539 896 aa12.14□□□□□ -0.47
SRSF4-205ENST00000497015 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
SRSF4-205ENST00000497015 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-205ENST00000497015 CAP2P40123 477 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 PHKA1P46020 1223 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 TRPV1Q8NER1 839 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
SRSF4-205ENST00000497015 TRIM43Q96BQ3 446 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-205ENST00000497015 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-205ENST00000497015 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRSF4-205ENST00000497015 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 EYA2O00167 538 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 BCAR3O75815 825 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 MS4A1P11836 297 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 TRIM27P14373 513 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 HERVK_113P62684 666 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 LOC285556D6RIA3 1793 aa12.12□□□□□ -0.47
SRSF4-205ENST00000497015 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 CNMDO75829 334 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 GNAI3P08754 354 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 SLC5A1P13866 664 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 BTDP43251 543 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
SRSF4-205ENST00000497015 TRMT44Q8IYL2 757 aaKnown RBP12.11□□□□□ -0.47
SRSF4-205ENST00000497015 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 LPAR1Q92633 364 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 DDX20Q9UHI6 824 aaKnown RBP12.11□□□□□ -0.47
SRSF4-205ENST00000497015 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
SRSF4-205ENST00000497015 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 ZMYND10O75800 440 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 ADORA1P30542 326 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 MAPK4P31152 587 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 RGS2P41220 211 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 BACE1P56817 501 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 ERVK-24P63145 666 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 MAP3K12Q12852 859 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.47
SRSF4-205ENST00000497015 MTMR2Q13614 643 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 PLEKHH3Q7Z736 793 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 FAM122AQ96E09 287 aa12.1□□□□□ -0.47
SRSF4-205ENST00000497015 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
SRSF4-205ENST00000497015 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 DNM1LO00429 736 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms