RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 SLITRK5O94991 958 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 MCATQ8IVS2 390 aaKnown RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 GRIN3BO60391 1043 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 EOMESO95936 686 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 CRKP46108 304 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 METTL16Q86W50 562 aaKnown RBP8.18□□□□□ -1.1
SNX13-211ENST00000496855 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 HEXIM2Q96MH2 286 aaKnown RBP8.18□□□□□ -1.1
SNX13-211ENST00000496855 MIPEPQ99797 713 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 SPON2Q9BUD6 331 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 PCDHGB7Q9Y5F8 929 aa8.18□□□□□ -1.1
SNX13-211ENST00000496855 HTR3BO95264 441 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 DPH2Q9BQC3 489 aaPredicted RBP8.17□□□□□ -1.1
SNX13-211ENST00000496855 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 REV1Q9UBZ9 1251 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 GTF2IRD1Q9UHL9 959 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 U3KQE9 123 aa8.17□□□□□ -1.1
SNX13-211ENST00000496855 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNX13-211ENST00000496855 OXCT1P55809 520 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 LETMD1Q6P1Q0 360 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 ZNF428Q96B54 188 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 EAF1Q96JC9 268 aaPredicted RBP8.16□□□□□ -1.1
SNX13-211ENST00000496855 BRMS1Q9HCU9 246 aa8.16□□□□□ -1.1
SNX13-211ENST00000496855 BSDC1Q9NW68 430 aaPredicted RBP8.16□□□□□ -1.1
SNX13-211ENST00000496855 DDX41Q9UJV9 622 aaKnown RBP8.16□□□□□ -1.1
SNX13-211ENST00000496855 PRNPP04156 253 aa8.15□□□□□ -1.1
SNX13-211ENST00000496855 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.1
SNX13-211ENST00000496855 HDLBPQ00341 1268 aaKnown RBP8.15□□□□□ -1.1
SNX13-211ENST00000496855 ARHGAP27Q6ZUM4 889 aa8.15□□□□□ -1.1
SNX13-211ENST00000496855 FAM13CQ8NE31 585 aa8.15□□□□□ -1.1
SNX13-211ENST00000496855 RIN3Q8TB24 985 aa8.15□□□□□ -1.1
SNX13-211ENST00000496855 PRDM5Q9NQX1 630 aaPredicted RBP8.15□□□□□ -1.1
SNX13-211ENST00000496855 UPK3BL1B0FP48 263 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 UPK3BL2E5RIL1 263 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 YARSP54577 528 aaKnown RBP8.14□□□□□ -1.11
SNX13-211ENST00000496855 SEZ6Q53EL9 994 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 NBPF11Q86T75 865 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 PLD6Q8N2A8 252 aaKnown RBP8.14□□□□□ -1.11
SNX13-211ENST00000496855 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
SNX13-211ENST00000496855 MAPK8IP1Q9UQF2 711 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
SNX13-211ENST00000496855 ADAMTS4O75173 837 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 CEACAM5P06731 702 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 NT5DC4Q86YG4 428 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 NKD1Q969G9 470 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 ATE1O95260 518 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 WNT11O96014 354 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 C9orf131Q5VYM1 1079 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 ZNF746Q6NUN9 644 aaPredicted RBP8.13□□□□□ -1.11
SNX13-211ENST00000496855 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 SLITRK4Q8IW52 837 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 SLFN12Q8IYM2 578 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 KLHL3Q9UH77 587 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 PLAGL2Q9UPG8 496 aa8.13□□□□□ -1.11
SNX13-211ENST00000496855 CNTNAP4Q9C0A0 1308 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 CHURC1-FNTBB4DL54 471 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 DNAJA2O60884 412 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 ITIH2P19823 946 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 MLECQ14165 292 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
SNX13-211ENST00000496855 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
SNX13-211ENST00000496855 CYB5D2Q8WUJ1 264 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
SNX13-211ENST00000496855 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
SNX13-211ENST00000496855 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 MCM4P33991 863 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
SNX13-211ENST00000496855 ZNF165P49910 485 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 SFRP5Q5T4F7 317 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 CDH24Q86UP0 819 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 DNAJB8Q8NHS0 232 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 TNKS2Q9H2K2 1166 aa8.11□□□□□ -1.11
SNX13-211ENST00000496855 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 CLCQ05315 142 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 XP32Q5T750 250 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 C22orf34Q6ZV56 151 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
SNX13-211ENST00000496855 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
SNX13-211ENST00000496855 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.1□□□□□ -1.11
SNX13-211ENST00000496855 ZNF865P0CJ78 1059 aaPredicted RBP8.09□□□□□ -1.11
SNX13-211ENST00000496855 CYP7A1P22680 504 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 ETV3P41162 512 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 NKPD1Q17RQ9 610 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 NFXL1Q6ZNB6 911 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms