RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
SMARCD3-215ENST00000496530 ZHX2Q9Y6X8 837 aa9.74□□□□□ -0.85
SMARCD3-215ENST00000496530 ATAD5Q96QE3 1844 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 TESPA1A2RU30 521 aaPredicted RBP9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 USP17L5A8MUK1 530 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 PHF20L1A8MW92 1017 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 M0R2C6 588 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 IRF6O14896 467 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 PTPRAP18433 802 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 GJA5P36382 358 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 PABPC4Q13310 644 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 ARHGEF6Q15052 776 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 TAF1CQ15572 869 aaPredicted RBP9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 STK11IPQ8N1F8 1099 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 SDR42E1Q8WUS8 393 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 BACH2Q9BYV9 841 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 ZNF287Q9HBT7 754 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 DCP1AQ9NPI6 582 aaPredicted RBP9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 SWAP70Q9UH65 585 aa9.73□□□□□ -0.85
SMARCD3-215ENST00000496530 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 GPAA1O43292 621 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 PRKAB2O43741 272 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 REC8O95072 547 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 TBC1D8O95759 1140 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 TDO2P48775 406 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 CERKLQ49MI3 558 aaPredicted RBP9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 NOM1Q5C9Z4 860 aaKnown RBP9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 GIMAP6Q6P9H5 292 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 GADL1Q6ZQY3 521 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 MS4A4AQ96JQ5 239 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 TMOD4Q9NZQ9 345 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 KCNH4Q9UQ05 1017 aa9.72□□□□□ -0.85
SMARCD3-215ENST00000496530 TRIM75PA6NK02 468 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 MINDY4BA8MYZ0 360 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 C19orf81C9J6K1 198 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 GPR25O00155 361 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 SGSM2O43147 1006 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 FKTNO75072 461 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 DSG3P32926 999 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 PTH1RQ03431 593 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 KIF22Q14807 665 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 ABCB5Q2M3G0 1257 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 C8orf34Q49A92 452 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 ANKRD23Q86SG2 305 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 ZNF280CQ8ND82 737 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 BRI3BPQ8WY22 251 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 ERO1AQ96HE7 468 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 STRBPQ96SI9 672 aaKnown RBP9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 PARK7Q99497 189 aaKnown RBP9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 AFG3L2Q9Y4W6 797 aa9.71□□□□□ -0.86
SMARCD3-215ENST00000496530 MYH8P13535 1937 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 BTBD19C9JJ37 291 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 PDHXO00330 501 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 GDF11O95390 407 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 OSBPP22059 807 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 MCCP23508 829 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 PLCD1P51178 756 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 USP14P54578 494 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 RAB3GAP1Q15042 981 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 COL13A1Q5TAT6 717 aaPredicted RBP9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 TATDN1Q6P1N9 297 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 CCDC17Q96LX7 622 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 FEZ1Q99689 392 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 NAPBQ9H115 298 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 ZBTB21Q9ULJ3 1066 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 SLC45A1Q9Y2W3 748 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 SIPA1L1O43166 1804 aa9.7□□□□□ -0.86
SMARCD3-215ENST00000496530 A0A0G2JLL6 359 aaPredicted RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 USP17L21D6R901 530 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 ZNF213O14771 459 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 CAPN15O75808 1086 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 HSPD1P10809 573 aaKnown RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 SP3Q02447 781 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 PDE4BQ07343 736 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 SPP2Q13103 211 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 CRHR2Q13324 411 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 DGKZQ13574 1117 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 C12orf60Q5U649 245 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 VPS53Q5VIR6 699 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 PRRT2Q7Z6L0 340 aaPredicted RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 IFNL3Q8IZI9 196 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 FAM43AQ8N2R8 423 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms