RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 AGTPBP1Q9UPW5 1226 aa20.55■□□□□ 0.88
COMMD3-214ENST00000496071 DDX60LQ5H9U9 1706 aaKnown RBP20.55■□□□□ 0.88
COMMD3-214ENST00000496071 ZFYP08048 801 aaPredicted RBP20.54■□□□□ 0.88
COMMD3-214ENST00000496071 PLCD1P51178 756 aa20.54■□□□□ 0.88
COMMD3-214ENST00000496071 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
COMMD3-214ENST00000496071 DDRGK1Q96HY6 314 aa20.54■□□□□ 0.88
COMMD3-214ENST00000496071 ZBTB21Q9ULJ3 1066 aa20.54■□□□□ 0.88
COMMD3-214ENST00000496071 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
COMMD3-214ENST00000496071 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 GDF11O95390 407 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 GNRH1P01148 92 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 MX1P20591 662 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 LACTBP83111 547 aaPredicted RBP20.53■□□□□ 0.88
COMMD3-214ENST00000496071 PABPC4Q13310 644 aaKnown RBP eCLIP20.53■□□□□ 0.882e-13■□□□□ 8.7
COMMD3-214ENST00000496071 SLFNL1Q499Z3 407 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 TSHZ3Q63HK5 1081 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 CPA4Q9UI42 421 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 PNMA3Q9UL41 463 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 PTPN22Q9Y2R2 807 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 ADGRA2Q96PE1 1338 aa20.53■□□□□ 0.88
COMMD3-214ENST00000496071 BACE1P56817 501 aa20.52■□□□□ 0.88
COMMD3-214ENST00000496071 JAG1P78504 1218 aa20.52■□□□□ 0.88
COMMD3-214ENST00000496071 CERKLQ49MI3 558 aaPredicted RBP20.52■□□□□ 0.88
COMMD3-214ENST00000496071 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
COMMD3-214ENST00000496071 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
COMMD3-214ENST00000496071 CABP5Q9NP86 173 aa20.52■□□□□ 0.88
COMMD3-214ENST00000496071 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 USP17L10C9JJH3 530 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 RNF113AO15541 343 aaKnown RBP20.51■□□□□ 0.87
COMMD3-214ENST00000496071 PRKAB2O43741 272 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 CYP2C8P10632 490 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 HMGCS2P54868 508 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 GABPAQ06546 454 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 EXOC6Q8TAG9 804 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 APPBP2Q92624 585 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 TMOD4Q9NZQ9 345 aa20.51■□□□□ 0.87
COMMD3-214ENST00000496071 GH2P01242 217 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 CHGBP05060 677 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 PRMT2P55345 433 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 ABCB5Q2M3G0 1257 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 OTUD7AQ8TE49 926 aaPredicted RBP20.5■□□□□ 0.87
COMMD3-214ENST00000496071 SMCR8Q8TEV9 937 aaPredicted RBP20.5■□□□□ 0.87
COMMD3-214ENST00000496071 SWAP70Q9UH65 585 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 SLC4A4Q9Y6R1 1079 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
COMMD3-214ENST00000496071 BAZ2AQ9UIF9 1905 aaKnown RBP20.49■□□□□ 0.87
COMMD3-214ENST00000496071 BCRP11274 1271 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 OSBPP22059 807 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 SHMT1P34896 483 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 RGS19P49795 217 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 MTMR2Q13614 643 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
COMMD3-214ENST00000496071 HOXD10P28358 340 aa20.48■□□□□ 0.87
COMMD3-214ENST00000496071 CAP1Q01518 475 aa20.48■□□□□ 0.87
COMMD3-214ENST00000496071 C12orf60Q5U649 245 aa20.48■□□□□ 0.87
COMMD3-214ENST00000496071 SMC5Q8IY18 1101 aa20.48■□□□□ 0.87
COMMD3-214ENST00000496071 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
COMMD3-214ENST00000496071 USP17L12C9JPN9 530 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 USP17L21D6R901 530 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 GNAT2P19087 354 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 PSMC4P43686 418 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 GCLCP48506 637 aaPredicted RBP20.47■□□□□ 0.87
COMMD3-214ENST00000496071 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
COMMD3-214ENST00000496071 GIMAP6Q6P9H5 292 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 USP17L2Q6R6M4 530 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 OSBP2Q969R2 916 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 MYH8P13535 1937 aa20.47■□□□□ 0.87
COMMD3-214ENST00000496071 FMNL1O95466 1100 aaPredicted RBP20.46■□□□□ 0.87
COMMD3-214ENST00000496071 CYP2D6P10635 497 aa20.46■□□□□ 0.87
COMMD3-214ENST00000496071 HOXA7P31268 230 aaPredicted RBP20.46■□□□□ 0.87
COMMD3-214ENST00000496071 USP14P54578 494 aa20.46■□□□□ 0.87
COMMD3-214ENST00000496071 PDE1AP54750 535 aa20.46■□□□□ 0.87
COMMD3-214ENST00000496071 ARHGAP39Q9C0H5 1083 aa20.46■□□□□ 0.87
COMMD3-214ENST00000496071 FCGRTP55899 365 aa20.45■□□□□ 0.86
COMMD3-214ENST00000496071 CTR9Q6PD62 1173 aa20.45■□□□□ 0.86
COMMD3-214ENST00000496071 NBPF11Q86T75 865 aa20.45■□□□□ 0.86
COMMD3-214ENST00000496071 CCDC17Q96LX7 622 aa20.45■□□□□ 0.86
COMMD3-214ENST00000496071 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
COMMD3-214ENST00000496071 ARPP21Q9UBL0 812 aaPredicted RBP20.45■□□□□ 0.86
COMMD3-214ENST00000496071 MGAMO43451 1857 aa20.45■□□□□ 0.86
COMMD3-214ENST00000496071 ZSWIM8A7E2V4 1837 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
COMMD3-214ENST00000496071 GPAA1O43292 621 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 IGHDP01880 384 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 IRX3P78415 501 aaPredicted RBP20.44■□□□□ 0.86
COMMD3-214ENST00000496071 EVX2Q03828 476 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 SBK1Q52WX2 424 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 EVI5LQ96CN4 794 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 DYNLL2Q96FJ2 89 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 TRIM47Q96LD4 638 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 C12orf42Q96LP6 360 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 FEZ1Q99689 392 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 LNPKQ9C0E8 428 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 KIAA1683Q9H0B3 1180 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 SRRDQ9UH36 339 aa20.44■□□□□ 0.86
COMMD3-214ENST00000496071 PTCH2Q9Y6C5 1203 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms