RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 FAM160A1Q05DH4 1040 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 SLBPQ14493 270 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC39-207ENST00000495817 UBE3DQ7Z6J8 389 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 MRPL41Q8IXM3 137 aaKnown RBP9.13□□□□□ -0.95
CCDC39-207ENST00000495817 MFSD2AQ8NA29 543 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 FOXQ1Q9C009 403 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 FBRSQ9HAH7 460 aa9.13□□□□□ -0.95
CCDC39-207ENST00000495817 PGRP06401 933 aa9.12□□□□□ -0.95
CCDC39-207ENST00000495817 GMLQ99445 158 aa9.12□□□□□ -0.95
CCDC39-207ENST00000495817 GTF2IRD1Q9UHL9 959 aa9.12□□□□□ -0.95
CCDC39-207ENST00000495817 INPP5FQ9Y2H2 1132 aa9.12□□□□□ -0.95
CCDC39-207ENST00000495817 PRR36Q9H6K5 1346 aa9.11□□□□□ -0.95
CCDC39-207ENST00000495817 CST3P01034 146 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-207ENST00000495817 PRNPP04156 253 aa9.11□□□□□ -0.95
CCDC39-207ENST00000495817 HOXA10P31260 410 aaPredicted RBP9.11□□□□□ -0.95
CCDC39-207ENST00000495817 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
CCDC39-207ENST00000495817 REC114Q7Z4M0 266 aa9.11□□□□□ -0.95
CCDC39-207ENST00000495817 UBXN4Q92575 508 aa9.11□□□□□ -0.95
CCDC39-207ENST00000495817 LRRC4CQ9HCJ2 640 aa9.11□□□□□ -0.95
CCDC39-207ENST00000495817 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCDC39-207ENST00000495817 GREM1O60565 184 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 LEFTY1O75610 366 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 MED26O95402 600 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 GJA8P48165 433 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 TNNI2P48788 182 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 NKG7Q16617 165 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 SLC6A19Q695T7 634 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 ZNF746Q6NUN9 644 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-207ENST00000495817 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
CCDC39-207ENST00000495817 BSDC1Q9NW68 430 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-207ENST00000495817 TMEM201Q5SNT2 666 aa9.09□□□□□ -0.95
CCDC39-207ENST00000495817 VSIG10LQ86VR7 867 aa9.09□□□□□ -0.95
CCDC39-207ENST00000495817 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
CCDC39-207ENST00000495817 ZNF296Q8WUU4 475 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-207ENST00000495817 TMEM87BQ96K49 555 aa9.09□□□□□ -0.95
CCDC39-207ENST00000495817 COX4I2Q96KJ9 171 aa9.09□□□□□ -0.95
CCDC39-207ENST00000495817 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
CCDC39-207ENST00000495817 PRAMEF13Q5VWM6 474 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 KIAA0825Q8IV33 1275 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 TANGO6Q9C0B7 1094 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 PRDM5Q9NQX1 630 aaPredicted RBP9.08□□□□□ -0.96
CCDC39-207ENST00000495817 TJP2Q9UDY2 1190 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 ZC3H7BQ9UGR2 993 aaKnown RBP9.08□□□□□ -0.96
CCDC39-207ENST00000495817 ADAMTS1Q9UHI8 967 aa9.08□□□□□ -0.96
CCDC39-207ENST00000495817 SLITRK5O94991 958 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 PLCG1P19174 1290 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 YARSP54577 528 aaKnown RBP9.07□□□□□ -0.96
CCDC39-207ENST00000495817 ARID5AQ03989 594 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 PAK2Q13177 524 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 ARMC5Q96C12 935 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 ACSF2Q96CM8 615 aaPredicted RBP9.07□□□□□ -0.96
CCDC39-207ENST00000495817 MISP3Q96FF7 219 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 MIPEPQ99797 713 aa9.07□□□□□ -0.96
CCDC39-207ENST00000495817 ANGEL1Q9UNK9 670 aaKnown RBP9.07□□□□□ -0.96
CCDC39-207ENST00000495817 HTR3BO95264 441 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 MLECQ14165 292 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 LETMD1Q6P1Q0 360 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 C22orf34Q6ZV56 151 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 STK11IPQ8N1F8 1099 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 RASGRP4Q8TDF6 673 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 SPATA32Q96LK8 384 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 SPON2Q9BUD6 331 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 NT5C1AQ9BXI3 368 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 POLR3KQ9Y2Y1 108 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-207ENST00000495817 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
CCDC39-207ENST00000495817 LOC105371045A0A1W2PR82 267 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 EOMESO95936 686 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 CEACAM5P06731 702 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 OXCT1P55809 520 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 APOBRQ0VD83 1088 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 IFI16Q16666 785 aaKnown RBP9.05□□□□□ -0.96
CCDC39-207ENST00000495817 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 FBXO27Q8NI29 283 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 GPRASP2Q96D09 838 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 CORINQ9Y5Q5 1042 aa9.05□□□□□ -0.96
CCDC39-207ENST00000495817 GNAT3A8MTJ3 354 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 WNT11O96014 354 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 REXO1Q8N1G1 1221 aaKnown RBP9.04□□□□□ -0.96
CCDC39-207ENST00000495817 FAM181AQ8N9Y4 354 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 CYB5D2Q8WUJ1 264 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 HEXIM2Q96MH2 286 aaKnown RBP9.04□□□□□ -0.96
CCDC39-207ENST00000495817 REV1Q9UBZ9 1251 aa9.04□□□□□ -0.96
CCDC39-207ENST00000495817 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
CCDC39-207ENST00000495817 TLR3O15455 904 aaKnown RBP9.03□□□□□ -0.96
CCDC39-207ENST00000495817 ATE1O95260 518 aa9.03□□□□□ -0.96
CCDC39-207ENST00000495817 CYP7A1P22680 504 aa9.03□□□□□ -0.96
CCDC39-207ENST00000495817 DNAJA1P31689 397 aaKnown RBP9.03□□□□□ -0.96
CCDC39-207ENST00000495817 ETV3P41162 512 aa9.03□□□□□ -0.96
CCDC39-207ENST00000495817 CRKP46108 304 aa9.03□□□□□ -0.96
CCDC39-207ENST00000495817 FAM13CQ8NE31 585 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms