RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 UVSSAQ2YD98 709 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 CFAP45Q9UL16 551 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 FOSBP53539 338 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 FKBP1AP62942 108 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 TTC6Q86TZ1 520 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 MAPKAPK5Q8IW41 473 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 FANCBQ8NB91 859 aa21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.5■■□□□ 1.03
TSPAN4-212ENST00000494815 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
TSPAN4-212ENST00000494815 TTF2Q9UNY4 1162 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-212ENST00000494815 DLEC1Q9Y238 1755 aa21.49■■□□□ 1.03
TSPAN4-212ENST00000494815 FLT1P17948 1338 aa21.49■■□□□ 1.03
TSPAN4-212ENST00000494815 FMNL1O95466 1100 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 CALM1P0DP23 149 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 CALM2P0DP24 149 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 CALM3P0DP25 149 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 GUCY1B3Q02153 619 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 CATIPQ7Z7H3 387 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 WASF1Q92558 559 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 SPATA32Q96LK8 384 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 ZNF287Q9HBT7 754 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 DDX60LQ5H9U9 1706 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 TSPY2A6NKD2 308 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 DDAH1O94760 285 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 POLR3DP05423 398 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 SSRP1Q08945 709 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 STRIP1Q5VSL9 837 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 PHKBQ93100 1093 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 ALG1Q9BT22 464 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 CDK5RAP2Q96SN8 1893 aa21.48■■□□□ 1.03
TSPAN4-212ENST00000494815 HHIPL2Q6UWX4 724 aa21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 LEO1Q8WVC0 666 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 CCDC178Q5BJE1 867 aa21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 BRAPQ7Z569 592 aa21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 ZNF396Q96N95 335 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 TFIP11Q9UBB9 837 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-212ENST00000494815 ECE2O60344 883 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 FAM47AQ5JRC9 791 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 MKNK2Q9HBH9 465 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 ZNF219Q9P2Y4 722 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 PDE4CQ08493 712 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 TROAPQ12815 778 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 TTLL6Q8N841 843 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 MRIQ9BWK5 157 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 SLC26A6Q9BXS9 759 aa21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 RBM28Q9NW13 759 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-212ENST00000494815 F8W031 263 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 PLCD1P51178 756 aa21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 CRACR2BQ8N4Y2 399 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 TEKT1Q969V4 418 aa21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 DYNLL2Q96FJ2 89 aa21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 SAP30BPQ9UHR5 308 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-212ENST00000494815 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 SLC4A8Q2Y0W8 1093 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 C16orf86Q6ZW13 317 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 NBPF11Q86T75 865 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 TCP11L1Q9NUJ3 509 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 FOCADQ5VW36 1801 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 TFAP4Q01664 338 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 TRIM29Q14134 588 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 DGKHQ86XP1 1220 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 ANKS1AQ92625 1134 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 MXD3Q9BW11 206 aa21.44■■□□□ 1.02
TSPAN4-212ENST00000494815 LETM1O95202 739 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 DEXIO95424 95 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 HDLBPQ00341 1268 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 KIF23Q02241 960 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 DACT2Q5SW24 774 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 ZNF444Q8N0Y2 327 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 AIFM3Q96NN9 605 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 RNF26Q9BY78 433 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 C21orf2O43822 256 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 NMT2O60551 498 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 CCDC93Q567U6 631 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 KRT40Q6A162 431 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 RCOR1Q9UKL0 485 aa21.43■■□□□ 1.02
TSPAN4-212ENST00000494815 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 AOC3Q16853 763 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 RCSD1Q6JBY9 416 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 MYRIPQ8NFW9 859 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 GJB4Q9NTQ9 266 aa21.42■■□□□ 1.02
TSPAN4-212ENST00000494815 TSPY3P0CV98 308 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 TSPY8P0CW00 308 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 RASA1P20936 1047 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 WDHD1O75717 1129 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-212ENST00000494815 CDK8P49336 464 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms