RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 DRP2Q13474 957 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 IRF5Q13568 498 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 TUBB2AQ13885 445 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 RBBP5Q15291 538 aaKnown RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 PLEKHO1Q53GL0 409 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 HSP90B2PQ58FF3 399 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 BEND6Q5SZJ8 279 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 VPS53Q5VIR6 699 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 CDCA2Q69YH5 1023 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 NAIF1Q69YI7 327 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 ISM2Q6H9L7 571 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 RCSD1Q6JBY9 416 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 CEP85Q6P2H3 762 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 FOXR1Q6PIV2 292 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 TRIM65Q6PJ69 517 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 C11orf57Q6ZUT1 292 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 SH3BP5LQ7L8J4 393 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 BRAPQ7Z569 592 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ANKRD23Q86SG2 305 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 MORC1Q86VD1 984 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 IQCA1Q86XH1 822 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ZKSCAN4Q969J2 545 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 MKL1Q969V6 931 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 KIFC2Q96AC6 838 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ZSCAN31Q96LW9 406 aaPredicted RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 PRAM1Q96QH2 718 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 TUBB2BQ9BVA1 445 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 FAM204AQ9H8W3 233 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ATP6V0A4Q9HBG4 840 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 PDE11AQ9HCR9 933 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 HOMER3Q9NSC5 361 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ANO10Q9NW15 660 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 TOR4AQ9NXH8 423 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 DACT1Q9NYF0 836 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 FKBPLQ9UIM3 349 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ZNFX1Q9P2E3 1918 aaKnown RBP3.12□□□□□ -1.91
MDC1-208ENST00000494654 PKD1L3Q7Z443 1732 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 TOGARAM1Q9Y4F4 1720 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 GRIN2DO15399 1336 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 CDHR2Q9BYE9 1310 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 UBR2Q8IWV8 1755 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 SCN11AQ9UI33 1791 aa3.12□□□□□ -1.91
MDC1-208ENST00000494654 ANKARQ7Z5J8 1434 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 BCL9LQ86UU0 1499 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 VWA3AA6NCI4 1184 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 SRRM3A6NNA2 597 aaPredicted RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 A6NNZ2 444 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 POTECB2RU33 542 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 H7C1W4 665 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 EBAG9O00559 213 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 WNT7AO00755 349 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 LIN7AO14910 233 aaPredicted RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 FANCGO15287 622 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 MAFGO15525 162 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ARHGAP6O43182 974 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 MYO1BO43795 1136 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 COQ9O75208 318 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 RTN2O75298 545 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 HMMRO75330 724 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 NEBLO76041 1014 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 URI1O94763 535 aaPredicted RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 LARGE1O95461 756 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ALDH1A1P00352 501 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 PDCP20941 246 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 MCM3P25205 808 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 GJB2P29033 226 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 INPP5BP32019 993 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 PRPHP41219 470 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ARHGAP25P42331 645 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 FNTAP49354 379 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 AMPHP49418 695 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 LIG3P49916 1009 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 PDE1AP54750 535 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 AK2P54819 239 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ST3GAL1Q11201 340 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ARID5BQ14865 1188 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 SLMAPQ14BN4 828 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 SETDB1Q15047 1291 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 SLC5A9Q2M3M2 681 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 KIF4BQ2VIQ3 1234 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 TUBB8Q3ZCM7 444 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 FILIP1LQ4L180 1135 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 TMEM259Q4ZIN3 620 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 ARMCX5Q6P1M9 558 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 NOL8Q76FK4 1167 aaKnown RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 SRGAP1Q7Z6B7 1085 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 SH3RF1Q7Z6J0 888 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 YTHDF3Q7Z739 585 aaKnown RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 KIAA1328Q86T90 577 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 HOMER1Q86YM7 354 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 CCDC50Q8IVM0 306 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 CCAR1Q8IX12 1150 aaKnown RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 DHX40Q8IX18 779 aaKnown RBP3.11□□□□□ -1.91
MDC1-208ENST00000494654 MAB21L3Q8N8X9 362 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 EHBP1Q8NDI1 1231 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 OR8K1Q8NGG5 319 aa3.11□□□□□ -1.91
MDC1-208ENST00000494654 MAGEC3Q8TD91 643 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms