RNA–Protein interactions for RNA: ENST00000494641.1

TRMT2A-219, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-219ENST00000494641 ZKSCAN1P17029 563 aaPredicted RBP21.37■■□□□ 1.01
TRMT2A-219ENST00000494641 MVPQ14764 893 aaKnown RBP21.37■■□□□ 1.01
TRMT2A-219ENST00000494641 SH3RF3Q8TEJ3 882 aaPredicted RBP21.37■■□□□ 1.01
TRMT2A-219ENST00000494641 MAST2Q6P0Q8 1798 aa21.37■■□□□ 1.01
TRMT2A-219ENST00000494641 FRMPD3Q5JV73 1810 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 ERVK-9P63128 1117 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 ERVK-24P63145 666 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 METTL16Q86W50 562 aaKnown RBP21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 SPATA5Q8NB90 893 aa21.36■■□□□ 1.01
TRMT2A-219ENST00000494641 E9PSI1 815 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 ANP32CO43423 234 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 MAPK4P31152 587 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 GSTO1P78417 241 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 TRMT44Q8IYL2 757 aaKnown RBP21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 SMC4Q9NTJ3 1288 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 PI4KBQ9UBF8 816 aa21.35■■□□□ 1.01
TRMT2A-219ENST00000494641 LDHCP07864 332 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 ARID4AP29374 1257 aaPredicted RBP21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 FAM161BQ96MY7 647 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 APBA2Q99767 749 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 EMILIN3Q9NT22 766 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 TMOD4Q9NZQ9 345 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
TRMT2A-219ENST00000494641 TTC28Q96AY4 2481 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 CNMDO75829 334 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 ASNSP08243 561 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 RGS2P41220 211 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 MCAMP43121 646 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 PLEKHH3Q7Z736 793 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 RAI14Q9P0K7 980 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 AKAP2Q9Y2D5 859 aa21.33■■□□□ 1.01
TRMT2A-219ENST00000494641 C19orf81C9J6K1 198 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 GDF11O95390 407 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 MTX1Q13505 466 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 PDE3AQ14432 1141 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 ADGRA1Q86SQ6 560 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 PAGR1Q9BTK6 254 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 LTBP2Q14767 1821 aa21.32■■□□□ 1
TRMT2A-219ENST00000494641 USP17L10C9JJH3 530 aa21.31■■□□□ 1
TRMT2A-219ENST00000494641 NEUROD6Q96NK8 337 aa21.31■■□□□ 1
TRMT2A-219ENST00000494641 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
TRMT2A-219ENST00000494641 ZBTB21Q9ULJ3 1066 aa21.31■■□□□ 1
TRMT2A-219ENST00000494641 FLT1P17948 1338 aa21.3■■□□□ 1
TRMT2A-219ENST00000494641 SRGAP3O43295 1099 aa21.3■■□□□ 1
TRMT2A-219ENST00000494641 IGHA2P01877 340 aa21.3■■□□□ 1
TRMT2A-219ENST00000494641 MAP2K5Q13163 448 aa21.3■■□□□ 1
TRMT2A-219ENST00000494641 MAPKAPK5Q8IW41 473 aa21.3■■□□□ 1
TRMT2A-219ENST00000494641 SENP6Q9GZR1 1112 aaPredicted RBP21.3■■□□□ 1
TRMT2A-219ENST00000494641 AATFQ9NY61 560 aaKnown RBP eCLIP21.3■■□□□ 1
TRMT2A-219ENST00000494641 FOCADQ5VW36 1801 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 PPP4CP60510 307 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 TRMT2AQ8IZ69 625 aaKnown RBP21.29■■□□□ 1
TRMT2A-219ENST00000494641 TRPV1Q8NER1 839 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 TGFBRAP1Q8WUH2 860 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 PALD1Q9ULE6 856 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 NDUFB9Q9Y6M9 179 aa21.29■■□□□ 1
TRMT2A-219ENST00000494641 FOXP4Q8IVH2 680 aaPredicted RBP21.28■■□□□ 1
TRMT2A-219ENST00000494641 MUC3AQ02505 3323 aa21.28■■□□□ 1
TRMT2A-219ENST00000494641 ATN1P54259 1190 aaPredicted RBP21.27■■□□□ 1
TRMT2A-219ENST00000494641 GTF3C2Q8WUA4 911 aaPredicted RBP21.27■■□□□ 1
TRMT2A-219ENST00000494641 EDC3Q96F86 508 aaKnown RBP21.27■■□□□ 1
TRMT2A-219ENST00000494641 C12orf42Q96LP6 360 aa21.27■■□□□ 1
TRMT2A-219ENST00000494641 CDX2Q99626 313 aaPredicted RBP21.27■■□□□ 1
TRMT2A-219ENST00000494641 GINM1Q9NU53 330 aa21.27■■□□□ 1
TRMT2A-219ENST00000494641 LRP2BPQ9P2M1 347 aa21.27■■□□□ 1
TRMT2A-219ENST00000494641 DDX20Q9UHI6 824 aaKnown RBP21.27■■□□□ 1
TRMT2A-219ENST00000494641 HDAC5Q9UQL6 1122 aa21.27■■□□□ 1
TRMT2A-219ENST00000494641 HOXC6P09630 235 aa21.26■□□□□ 0.99
TRMT2A-219ENST00000494641 LBHD1Q9BQE6 289 aaPredicted RBP21.26■□□□□ 0.99
TRMT2A-219ENST00000494641 API5Q9BZZ5 524 aaKnown RBP21.26■□□□□ 0.99
TRMT2A-219ENST00000494641 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
TRMT2A-219ENST00000494641 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
TRMT2A-219ENST00000494641 PTPREP23469 700 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 RTP1P59025 263 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 SHHQ15465 462 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 C9orf50Q5SZB4 431 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 NAA16Q6N069 864 aaPredicted RBP21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 USP17L2Q6R6M4 530 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 NPLOC4Q8TAT6 608 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 LPAR1Q92633 364 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 BTBD7Q9P203 1132 aa21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 SAP30BPQ9UHR5 308 aaKnown RBP21.25■□□□□ 0.99
TRMT2A-219ENST00000494641 RLFQ13129 1914 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 SLC15A5A6NIM6 579 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 DNM1LO00429 736 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 GH2P01242 217 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 CYP2C19P33261 490 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 ZNF697Q5TEC3 545 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 MFSD14CQ5VZR4 134 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 CCAR1Q8IX12 1150 aaKnown RBP21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
TRMT2A-219ENST00000494641 PNMA6EA0A0J9YXQ4 647 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms