RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 MCM9Q9NXL9 1143 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 ZBTB21Q9ULJ3 1066 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 AGTPBP1Q9UPW5 1226 aa17.44■□□□□ 0.38
PMP22-206ENST00000494511 PRKAB2O43741 272 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 CTGFP29279 349 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 PSMC4P43686 418 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 MTMR2Q13614 643 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 PTCH2Q9Y6C5 1203 aa17.43■□□□□ 0.38
PMP22-206ENST00000494511 BRCA2P51587 3418 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 DDX60LQ5H9U9 1706 aaKnown RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 GH2P01242 217 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 CYP2D6P10635 497 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 BCRP11274 1271 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 TRIM47Q96LD4 638 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 EHD4Q9H223 541 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 DCP1AQ9NPI6 582 aaPredicted RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 BAZ2AQ9UIF9 1905 aaKnown RBP17.42■□□□□ 0.38
PMP22-206ENST00000494511 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
PMP22-206ENST00000494511 UBE3CQ15386 1083 aa17.41■□□□□ 0.38
PMP22-206ENST00000494511 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
PMP22-206ENST00000494511 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
PMP22-206ENST00000494511 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
PMP22-206ENST00000494511 SHMT1P34896 483 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 BACE1P56817 501 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 SH3D19Q5HYK7 790 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 PUS7LQ9H0K6 701 aaKnown RBP17.4■□□□□ 0.38
PMP22-206ENST00000494511 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 PNMA3Q9UL41 463 aa17.4■□□□□ 0.38
PMP22-206ENST00000494511 MGAMO43451 1857 aa17.39■□□□□ 0.38
PMP22-206ENST00000494511 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 MYCP01106 439 aaPredicted RBP17.39■□□□□ 0.37
PMP22-206ENST00000494511 OSBPP22059 807 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
PMP22-206ENST00000494511 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
PMP22-206ENST00000494511 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
PMP22-206ENST00000494511 KBTBD3Q8NAB2 608 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 SLC44A5Q8NCS7 719 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 SH3TC2Q8TF17 1288 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 ARMC5Q96C12 935 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
PMP22-206ENST00000494511 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
PMP22-206ENST00000494511 SRRDQ9UH36 339 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 SLC4A4Q9Y6R1 1079 aa17.38■□□□□ 0.37
PMP22-206ENST00000494511 DOCK3Q8IZD9 2030 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 C19orf81C9J6K1 198 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
PMP22-206ENST00000494511 GNRH1P01148 92 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 FCGRTP55899 365 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 GABPAQ06546 454 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 FEZ1Q99689 392 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 CABP5Q9NP86 173 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 ATP8A2Q9NTI2 1148 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 MYH8P13535 1937 aa17.37■□□□□ 0.37
PMP22-206ENST00000494511 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 ERC2O15083 957 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 MX1P20591 662 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 HOXD10P28358 340 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 IRX3P78415 501 aaPredicted RBP17.36■□□□□ 0.37
PMP22-206ENST00000494511 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
PMP22-206ENST00000494511 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 RAET1EQ8TD07 263 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 MYPNQ86TC9 1320 aa17.36■□□□□ 0.37
PMP22-206ENST00000494511 USP17L12C9JPN9 530 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 USP17L21D6R901 530 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 RNF113AO15541 343 aaKnown RBP17.35■□□□□ 0.37
PMP22-206ENST00000494511 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 PRMT2P55345 433 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 PRKCZQ05513 592 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 SEPT2Q15019 361 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 OSBP2Q969R2 916 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 DDRGK1Q96HY6 314 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
PMP22-206ENST00000494511 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
PMP22-206ENST00000494511 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
PMP22-206ENST00000494511 GABRQQ9UN88 632 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms