RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
ITGB1-217ENST00000494395 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-217ENST00000494395 BCL11AQ9H165 835 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 ZNF112Q9UJU3 913 aa10.64□□□□□ -0.71
ITGB1-217ENST00000494395 ATAD5Q96QE3 1844 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 FOXN1O15353 648 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 BAG3O95817 575 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 CHGBP05060 677 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-217ENST00000494395 MAP2K1Q02750 393 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-217ENST00000494395 PICALMQ13492 652 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 VGLL4Q14135 290 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 SLC9C2Q5TAH2 1124 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 HOOK2Q96ED9 719 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-217ENST00000494395 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 SNCAIPQ9Y6H5 919 aa10.63□□□□□ -0.71
ITGB1-217ENST00000494395 PTPRFP10586 1907 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 FLT1P17948 1338 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 ZNF532Q9HCE3 1301 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 ZBTB48P10074 688 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-217ENST00000494395 MX1P20591 662 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 INPP5BP32019 993 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 C6orf132Q5T0Z8 1188 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 MIGA2Q7L4E1 593 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
ITGB1-217ENST00000494395 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 KBTBD3Q8NAB2 608 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 MIGA1Q8NAN2 632 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 TGFBRAP1Q8WUH2 860 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 WNK4Q96J92 1243 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 WRNIP1Q96S55 665 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
ITGB1-217ENST00000494395 ZNF341Q9BYN7 854 aa10.62□□□□□ -0.71
ITGB1-217ENST00000494395 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-217ENST00000494395 BAZ2AQ9UIF9 1905 aaKnown RBP10.61□□□□□ -0.71
ITGB1-217ENST00000494395 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
ITGB1-217ENST00000494395 PDE1AP54750 535 aa10.61□□□□□ -0.71
ITGB1-217ENST00000494395 NUCB1Q02818 461 aa10.61□□□□□ -0.71
ITGB1-217ENST00000494395 UBE3CQ15386 1083 aa10.61□□□□□ -0.71
ITGB1-217ENST00000494395 NOL9Q5SY16 702 aaKnown RBP10.61□□□□□ -0.71
ITGB1-217ENST00000494395 LNPKQ9C0E8 428 aa10.61□□□□□ -0.71
ITGB1-217ENST00000494395 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
ITGB1-217ENST00000494395 MAGEB6P1A0A0J9YX57 407 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 SPDYE5A6NIY4 337 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 ERC2O15083 957 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 HSPA8P11142 646 aaKnown RBP10.6□□□□□ -0.71
ITGB1-217ENST00000494395 TM4SF4P48230 202 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 CHD1LQ86WJ1 897 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 MAPKAPK5Q8IW41 473 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 ZKSCAN4Q969J2 545 aaPredicted RBP10.6□□□□□ -0.71
ITGB1-217ENST00000494395 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
ITGB1-217ENST00000494395 FAM196BA6NMK8 535 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 CA12O43570 354 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 ERO1BQ86YB8 467 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 ZSCAN29Q8IWY8 852 aaPredicted RBP10.59□□□□□ -0.71
ITGB1-217ENST00000494395 LCORLQ8N3X6 602 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 OPTNQ96CV9 577 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
ITGB1-217ENST00000494395 PUS7LQ9H0K6 701 aaKnown RBP10.59□□□□□ -0.71
ITGB1-217ENST00000494395 DHX36Q9H2U1 1008 aaKnown RBP10.59□□□□□ -0.71
ITGB1-217ENST00000494395 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 SAGE1Q9NXZ1 904 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 CSADQ9Y600 493 aa10.59□□□□□ -0.71
ITGB1-217ENST00000494395 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
ITGB1-217ENST00000494395 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
ITGB1-217ENST00000494395 RRP1BQ14684 758 aaKnown RBP10.58□□□□□ -0.72
ITGB1-217ENST00000494395 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 OSBP2Q969R2 916 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 ARMT1Q9H993 441 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 RNF186Q9NXI6 227 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 PI4KBQ9UBF8 816 aa10.58□□□□□ -0.72
ITGB1-217ENST00000494395 HERC5Q9UII4 1024 aaKnown RBP10.58□□□□□ -0.72
ITGB1-217ENST00000494395 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 MYH8P13535 1937 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 CTNND1O60716 968 aaKnown RBP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 MBD4O95243 580 aa10.57□□□□□ -0.72
ITGB1-217ENST00000494395 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
ITGB1-217ENST00000494395 PPATQ06203 517 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms