RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ZFP64Q9NPA5 681 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 KCNQ5Q9NR82 932 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 BSDC1Q9NW68 430 aaPredicted RBP3.8□□□□□ -1.8
LMNB1-207ENST00000494185 ADAMTS1Q9UHI8 967 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 KCNH3Q9ULD8 1083 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 CSADQ9Y600 493 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 TMEM265A0A087WTH1 108 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 FAM221AA4D161 298 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 FAM155AB1AL88 458 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-207ENST00000494185 IGF2BP3O00425 579 aaKnown RBP eCLIP3.79□□□□□ -1.8
LMNB1-207ENST00000494185 GREM1O60565 184 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 CILPO75339 1184 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 RAG1P15918 1043 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 GARTP22102 1010 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 MCM4P33991 863 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 KIR3DL1P43629 444 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 CLCN7P51798 805 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 INPP5AQ14642 412 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 IFI16Q16666 785 aaKnown RBP3.79□□□□□ -1.8
LMNB1-207ENST00000494185 ZDHHC13Q8IUH4 622 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 MRPL41Q8IXM3 137 aaKnown RBP3.79□□□□□ -1.8
LMNB1-207ENST00000494185 PHACTR4Q8IZ21 702 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 REXO1Q8N1G1 1221 aaKnown RBP3.79□□□□□ -1.8
LMNB1-207ENST00000494185 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 FAM13CQ8NE31 585 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 NETO1Q8TDF5 533 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 NKD1Q969G9 470 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 FERD3LQ96RJ6 166 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 CRBNQ96SW2 442 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 MIPEPQ99797 713 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 NT5C1AQ9BXI3 368 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 LRRC4CQ9HCJ2 640 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 STRIP2Q9ULQ0 834 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 SLC12A7Q9Y666 1083 aa3.79□□□□□ -1.8
LMNB1-207ENST00000494185 GFRA2O00451 464 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 TLR3O15455 904 aaKnown RBP3.78□□□□□ -1.8
LMNB1-207ENST00000494185 WNT11O96014 354 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CST3P01034 146 aaPredicted RBP3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CEACAM5P06731 702 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CCNFP41002 786 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CDK8P49336 464 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 RING1Q06587 406 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CDK5R2Q13319 367 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 TMEM201Q5SNT2 666 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 SFRP5Q5T4F7 317 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 LETMD1Q6P1Q0 360 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 ZNF765Q7L2R6 523 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 OR6P1Q8NGX9 317 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CYB5D2Q8WUJ1 264 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 ASB11Q8WXH4 323 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 EAF1Q96JC9 268 aaPredicted RBP3.78□□□□□ -1.8
LMNB1-207ENST00000494185 TMEM87BQ96K49 555 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 DUSP23Q9BVJ7 150 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 TRIT1Q9H3H1 467 aaKnown RBP3.78□□□□□ -1.8
LMNB1-207ENST00000494185 ACBD3Q9H3P7 528 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 CAPN10Q9HC96 672 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 UBP1Q9NZI7 540 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 GMIPQ9P107 970 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 SLC5A6Q9Y289 635 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 INPP5FQ9Y2H2 1132 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 SNX11Q9Y5W9 270 aa3.78□□□□□ -1.8
LMNB1-207ENST00000494185 HTR3BO95264 441 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 TGFB1P01137 390 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 F13BP05160 661 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 NEFMP07197 916 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 ENDOUP21128 410 aaKnown RBP3.77□□□□□ -1.81
LMNB1-207ENST00000494185 GBP1P32455 592 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 CRKP46108 304 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 PAK2Q13177 524 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 SEZ6Q53EL9 994 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 PRAMEF13Q5VWM6 474 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 MCATQ8IVS2 390 aaKnown RBP3.77□□□□□ -1.81
LMNB1-207ENST00000494185 SLFN12Q8IYM2 578 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 MFSD4AQ8N468 514 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 FBXO27Q8NI29 283 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 PIWIL2Q8TC59 973 aaKnown RBP3.77□□□□□ -1.81
LMNB1-207ENST00000494185 GPRASP2Q96D09 838 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 HRASLS5Q96KN8 279 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 DHRS1Q96LJ7 313 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 CCDC74BQ96LY2 380 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 ASPNQ9BXN1 380 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.77□□□□□ -1.81
LMNB1-207ENST00000494185 LGR6Q9HBX8 967 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 C1GALT1Q9NS00 363 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 KLHL3Q9UH77 587 aa3.77□□□□□ -1.81
LMNB1-207ENST00000494185 PRR36Q9H6K5 1346 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 FAM170BA6NMN3 283 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 KIAA1324LA8MWY0 1029 aaPredicted RBP3.76□□□□□ -1.81
LMNB1-207ENST00000494185 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
LMNB1-207ENST00000494185 GRIN3BO60391 1043 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 NTF4P34130 210 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 GJA8P48165 433 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 CD97P48960 835 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 ZC3H6P61129 1189 aaKnown RBP3.76□□□□□ -1.81
LMNB1-207ENST00000494185 BBS9Q3SYG4 887 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 ARTNQ5T4W7 220 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 ANGEL2Q5VTE6 544 aaKnown RBP3.76□□□□□ -1.81
LMNB1-207ENST00000494185 SEZ6L2Q6UXD5 910 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 C22orf34Q6ZV56 151 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 SLITRK4Q8IW52 837 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms