RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 UBP1Q9NZI7 540 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 TJP2Q9UDY2 1190 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 POLR3KQ9Y2Y1 108 aaPredicted RBP9.12□□□□□ -0.95
SSB-212ENST00000494051 HYAL3O43820 417 aaPredicted RBP9.11□□□□□ -0.95
SSB-212ENST00000494051 CD97P48960 835 aa9.11□□□□□ -0.95
SSB-212ENST00000494051 PRAMEF13Q5VWM6 474 aa9.11□□□□□ -0.95
SSB-212ENST00000494051 KIAA0825Q8IV33 1275 aa9.11□□□□□ -0.95
SSB-212ENST00000494051 DPH2Q9BQC3 489 aaPredicted RBP9.11□□□□□ -0.95
SSB-212ENST00000494051 ROBO2Q9HCK4 1378 aa9.11□□□□□ -0.95
SSB-212ENST00000494051 CAP2P40123 477 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 CRKP46108 304 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 HDLBPQ00341 1268 aaKnown RBP9.1□□□□□ -0.95
SSB-212ENST00000494051 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 SEZ6Q53EL9 994 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 ARTNQ5T4W7 220 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 MFSD2AQ8NA29 543 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
SSB-212ENST00000494051 TMEM87BQ96K49 555 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 MIPEPQ99797 713 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 BRMS1Q9HCU9 246 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
SSB-212ENST00000494051 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
SSB-212ENST00000494051 SLITRK5O94991 958 aa9.09□□□□□ -0.95
SSB-212ENST00000494051 CST3P01034 146 aaPredicted RBP9.09□□□□□ -0.95
SSB-212ENST00000494051 RACK1P63244 317 aaKnown RBP9.09□□□□□ -0.95
SSB-212ENST00000494051 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
SSB-212ENST00000494051 ARHGAP27Q6ZUM4 889 aa9.09□□□□□ -0.95
SSB-212ENST00000494051 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
SSB-212ENST00000494051 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
SSB-212ENST00000494051 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
SSB-212ENST00000494051 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
SSB-212ENST00000494051 ZFP64Q9NPA5 681 aa9.09□□□□□ -0.95
SSB-212ENST00000494051 HTR3BO95264 441 aa9.08□□□□□ -0.96
SSB-212ENST00000494051 MCM4P33991 863 aa9.08□□□□□ -0.96
SSB-212ENST00000494051 EAF1Q96JC9 268 aaPredicted RBP9.08□□□□□ -0.96
SSB-212ENST00000494051 LRRC3Q9BY71 257 aa9.08□□□□□ -0.96
SSB-212ENST00000494051 REV1Q9UBZ9 1251 aa9.08□□□□□ -0.96
SSB-212ENST00000494051 ZC3H7BQ9UGR2 993 aaKnown RBP9.08□□□□□ -0.96
SSB-212ENST00000494051 UPK3BL1B0FP48 263 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 UPK3BL2E5RIL1 263 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 LETMD1Q6P1Q0 360 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 ZNF654Q8IZM8 581 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 FAM13CQ8NE31 585 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 NKD1Q969G9 470 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 NT5C1AQ9BXI3 368 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 KLHL3Q9UH77 587 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 GTF2IRD1Q9UHL9 959 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 TPX2Q9ULW0 747 aaKnown RBP9.07□□□□□ -0.96
SSB-212ENST00000494051 PCDHB14Q9Y5E9 798 aa9.07□□□□□ -0.96
SSB-212ENST00000494051 PRR36Q9H6K5 1346 aa9.06□□□□□ -0.96
SSB-212ENST00000494051 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
SSB-212ENST00000494051 EOMESO95936 686 aa9.06□□□□□ -0.96
SSB-212ENST00000494051 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
SSB-212ENST00000494051 RIN3Q8TB24 985 aa9.06□□□□□ -0.96
SSB-212ENST00000494051 HEXIM2Q96MH2 286 aaKnown RBP9.06□□□□□ -0.96
SSB-212ENST00000494051 PRDM5Q9NQX1 630 aaPredicted RBP9.06□□□□□ -0.96
SSB-212ENST00000494051 ITIH2P19823 946 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
SSB-212ENST00000494051 MSMPQ1L6U9 139 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 GK5Q6ZS86 529 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 FAM214BQ7L5A3 538 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 DTX1Q86Y01 620 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 U3KQE9 123 aa9.05□□□□□ -0.96
SSB-212ENST00000494051 SPINK2P20155 84 aa9.04□□□□□ -0.96
SSB-212ENST00000494051 MLECQ14165 292 aa9.04□□□□□ -0.96
SSB-212ENST00000494051 CDH24Q86UP0 819 aa9.04□□□□□ -0.96
SSB-212ENST00000494051 PLD6Q8N2A8 252 aaKnown RBP9.04□□□□□ -0.96
SSB-212ENST00000494051 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.04□□□□□ -0.96
SSB-212ENST00000494051 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
SSB-212ENST00000494051 ZNF165P49910 485 aa9.03□□□□□ -0.96
SSB-212ENST00000494051 OXCT1P55809 520 aa9.03□□□□□ -0.96
SSB-212ENST00000494051 CLCQ05315 142 aa9.03□□□□□ -0.96
SSB-212ENST00000494051 NETO1Q8TDF5 533 aa9.03□□□□□ -0.96
SSB-212ENST00000494051 BSDC1Q9NW68 430 aaPredicted RBP9.03□□□□□ -0.96
SSB-212ENST00000494051 GNAT3A8MTJ3 354 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 IGF2BP3O00425 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
SSB-212ENST00000494051 DNAJA2O60884 412 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 LCE1DQ5T752 114 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 NBPF11Q86T75 865 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 SLITRK4Q8IW52 837 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 REXO1Q8N1G1 1221 aaKnown RBP9.02□□□□□ -0.97
SSB-212ENST00000494051 CNTNAP4Q9C0A0 1308 aa9.02□□□□□ -0.97
SSB-212ENST00000494051 ATE1O95260 518 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 PAK2Q13177 524 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 SFRP5Q5T4F7 317 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
SSB-212ENST00000494051 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 MKNK2Q9HBH9 465 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
SSB-212ENST00000494051 MAPK8IP1Q9UQF2 711 aa9.01□□□□□ -0.97
SSB-212ENST00000494051 SLC22A31A6NKX4 558 aa9□□□□□ -0.97
SSB-212ENST00000494051 E9PSI1 815 aa9□□□□□ -0.97
SSB-212ENST00000494051 ADAMTS4O75173 837 aa9□□□□□ -0.97
SSB-212ENST00000494051 CBX7O95931 251 aa9□□□□□ -0.97
SSB-212ENST00000494051 WNT11O96014 354 aa9□□□□□ -0.97
SSB-212ENST00000494051 CEACAM5P06731 702 aa9□□□□□ -0.97
SSB-212ENST00000494051 TCF3P15923 654 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms