RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 MMP20O60882 483 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 BCAR3O75815 825 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 ADH6P28332 368 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 RARSP54136 660 aaKnown RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 TTC39BQ5VTQ0 682 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 ZNF496Q96IT1 587 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 ASB16Q96NS5 453 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 NIF3L1Q9GZT8 377 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 ABI2Q9NYB9 513 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 SIPA1L3O60292 1781 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 MRC1P22897 1456 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 BCL9O00512 1426 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 CT47B1P0C2W7 299 aaPredicted RBP8.38□□□□□ -1.07
TRA2B-216ENST00000493864 TTC5Q8N0Z6 440 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 SSH1Q8WYL5 1049 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 ACDQ96AP0 544 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
TRA2B-216ENST00000493864 ITGB4P16144 1822 aa8.38□□□□□ -1.07
TRA2B-216ENST00000493864 HEG1Q9ULI3 1381 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 SIN3BO75182 1162 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 TNFRSF21O75509 655 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 PSAPP07602 524 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
TRA2B-216ENST00000493864 GOLGA6L1Q8N7Z2 621 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
TRA2B-216ENST00000493864 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
TRA2B-216ENST00000493864 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
TRA2B-216ENST00000493864 RGPD3A6NKT7 1758 aaPredicted RBP8.36□□□□□ -1.07
TRA2B-216ENST00000493864 KDM3BQ7LBC6 1761 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 RGPD4Q7Z3J3 1758 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 PLIN1O60240 522 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 PHACTR2O75167 634 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 IGHA2P01877 340 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 EIF2S2P20042 333 aaKnown RBP8.36□□□□□ -1.07
TRA2B-216ENST00000493864 BAG6P46379 1132 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
TRA2B-216ENST00000493864 DNAJC14Q6Y2X3 702 aaPredicted RBP8.36□□□□□ -1.07
TRA2B-216ENST00000493864 FCHSD1Q86WN1 690 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 C1orf127Q8N9H9 656 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 SNX29Q8TEQ0 813 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
TRA2B-216ENST00000493864 USP16Q9Y5T5 823 aa8.36□□□□□ -1.07
TRA2B-216ENST00000493864 RNF123Q5XPI4 1314 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 TREHO43280 583 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 APBA3O96018 575 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 CYP2E1P05181 493 aaPredicted RBP8.35□□□□□ -1.07
TRA2B-216ENST00000493864 SNRPA1P09661 255 aaKnown RBP8.35□□□□□ -1.07
TRA2B-216ENST00000493864 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 MLLT1Q03111 559 aaPredicted RBP8.35□□□□□ -1.07
TRA2B-216ENST00000493864 ORC1Q13415 861 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 ALDH1L2Q3SY69 923 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 OR13H1Q8NG92 308 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 SMC4Q9NTJ3 1288 aa8.35□□□□□ -1.07
TRA2B-216ENST00000493864 DNAJB12Q9NXW2 375 aaKnown RBP8.35□□□□□ -1.07
TRA2B-216ENST00000493864 SOS1Q07889 1333 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 TUBGCP6Q96RT7 1819 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 PHF20L1A8MW92 1017 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 NEFLP07196 543 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 HOXB7P09629 217 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 CES1P23141 567 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 IRX6P78412 446 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 PLAURQ03405 335 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 G2E3Q7L622 706 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 DNAJC10Q8IXB1 793 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 FRAT1Q92837 279 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 ALKBH8Q96BT7 664 aaKnown RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 NSUN5Q96P11 429 aaKnown RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
TRA2B-216ENST00000493864 NOB1Q9ULX3 412 aaKnown RBP8.34□□□□□ -1.07
TRA2B-216ENST00000493864 KCPQ6ZWJ8 1503 aa8.34□□□□□ -1.08
TRA2B-216ENST00000493864 ANXA1P04083 346 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 A1BGP04217 495 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 ADH7P40394 386 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 DSC3Q14574 896 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
TRA2B-216ENST00000493864 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
TRA2B-216ENST00000493864 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms