RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 RANBP6O60518 1105 aaKnown RBP14.88□□□□□ -0.03
VPS52-220ENST00000493674 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
VPS52-220ENST00000493674 NOVP48745 357 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 RCAN1P53805 252 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 TCP10Q12799 353 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 KIF4BQ2VIQ3 1234 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 TMEM67Q5HYA8 995 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 ENAHQ8N8S7 591 aaPredicted RBP14.88□□□□□ -0.03
VPS52-220ENST00000493674 ANKS1AQ92625 1134 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 ZSCAN10Q96SZ4 725 aaPredicted RBP14.88□□□□□ -0.03
VPS52-220ENST00000493674 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 PI4KBQ9UBF8 816 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 HPS5Q9UPZ3 1129 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 TNKSO95271 1327 aa14.88□□□□□ -0.03
VPS52-220ENST00000493674 H7C1D1 291 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 IFIT3O14879 490 aaKnown RBP14.87□□□□□ -0.03
VPS52-220ENST00000493674 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
VPS52-220ENST00000493674 FGD1P98174 961 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
VPS52-220ENST00000493674 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 APOA5Q6Q788 366 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 IQCA1Q86XH1 822 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
VPS52-220ENST00000493674 NEDD1Q8NHV4 660 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 TRPM4Q8TD43 1214 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 IL17RBQ9NRM6 502 aa14.87□□□□□ -0.03
VPS52-220ENST00000493674 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 TCP10L2B9ZVM9 353 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 MAP3K10Q02779 954 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 WTAPQ15007 396 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 TBC1D10BQ4KMP7 808 aaPredicted RBP14.86□□□□□ -0.03
VPS52-220ENST00000493674 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 TATDN1Q6P1N9 297 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 NECAB1Q8N987 351 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 ZNF526Q8TF50 670 aaPredicted RBP14.86□□□□□ -0.03
VPS52-220ENST00000493674 TEPSINQ96N21 525 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 ZKSCAN3Q9BRR0 538 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 UBAC1Q9BSL1 405 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS52-220ENST00000493674 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
VPS52-220ENST00000493674 CIZ1Q9ULV3 898 aaPredicted RBP14.86□□□□□ -0.03
VPS52-220ENST00000493674 ASTN2O75129 1339 aaPredicted RBP14.86□□□□□ -0.03
VPS52-220ENST00000493674 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 TSPY2A6NKD2 308 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 TBC1D12O60347 775 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 EPS15P42566 896 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 TFAP4Q01664 338 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 SCRN1Q12765 414 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 CCDC178Q5BJE1 867 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 CCDC83Q8IWF9 413 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
VPS52-220ENST00000493674 HERC5Q9UII4 1024 aaKnown RBP14.85□□□□□ -0.03
VPS52-220ENST00000493674 PITPNM2Q9BZ72 1349 aa14.85□□□□□ -0.03
VPS52-220ENST00000493674 ERICH2A1L162 156 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 GOLGA8BA8MQT2 603 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 KIF3CO14782 793 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 NMT2O60551 498 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 TNNI2P48788 182 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 HIRAP54198 1017 aaPredicted RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 DGKHQ86XP1 1220 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 ZNF444Q8N0Y2 327 aaPredicted RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 SPRYD3Q8NCJ5 442 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 SMARCC2Q8TAQ2 1214 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 ADARB2Q9NS39 739 aaKnown RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
VPS52-220ENST00000493674 SSC5DA1L4H1 1573 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 TRPM7Q96QT4 1865 aa14.84□□□□□ -0.03
VPS52-220ENST00000493674 CTDNEP1O95476 244 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 HSP90AA1P07900 732 aaKnown RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 SLURP2P0DP57 97 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 AKR1B1P15121 316 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 VEGFAP15692 232 aaPredicted RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 TMEM39BQ9GZU3 492 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 NMRK2Q9NPI5 230 aa14.83□□□□□ -0.04
VPS52-220ENST00000493674 FAM217BQ9NTX9 383 aaPredicted RBP14.83□□□□□ -0.04
VPS52-220ENST00000493674 CCDC69A6NI79 296 aa14.82□□□□□ -0.04
VPS52-220ENST00000493674 ZBTB43O43298 467 aa14.82□□□□□ -0.04
VPS52-220ENST00000493674 DDAH1O94760 285 aa14.82□□□□□ -0.04
VPS52-220ENST00000493674 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
VPS52-220ENST00000493674 TROAPQ12815 778 aa14.82□□□□□ -0.04
VPS52-220ENST00000493674 STK3Q13188 491 aa14.82□□□□□ -0.04
VPS52-220ENST00000493674 RASA3Q14644 834 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms