RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GH2P01242 217 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
CCM2-217ENST00000492883 CETPP11597 493 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 CHMLP26374 656 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 CDK8P49336 464 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 CCL15Q16663 113 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 AFG3L2Q9Y4W6 797 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
CCM2-217ENST00000492883 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 CXCL11O14625 94 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 CA12O43570 354 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 TRPA1O75762 1119 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
CCM2-217ENST00000492883 JAG1P78504 1218 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 SPP2Q13103 211 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 RAB3GAP1Q15042 981 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 BMP2KLQ5H9B9 411 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 TBC1D2Q9BYX2 928 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
CCM2-217ENST00000492883 FOXP2O15409 715 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 ALDH1A1P00352 501 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 FGAP02671 866 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 PPARAQ07869 468 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 ALX1Q15699 326 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 SHROOM1Q2M3G4 852 aaPredicted RBP16.65■□□□□ 0.26
CCM2-217ENST00000492883 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
CCM2-217ENST00000492883 AK9Q5TCS8 1911 aa16.64■□□□□ 0.26
CCM2-217ENST00000492883 FOXN1O15353 648 aa16.64■□□□□ 0.25
CCM2-217ENST00000492883 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
CCM2-217ENST00000492883 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
CCM2-217ENST00000492883 PTPN18Q99952 460 aa16.64■□□□□ 0.25
CCM2-217ENST00000492883 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
CCM2-217ENST00000492883 IGF2BP3O00425 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCM2-217ENST00000492883 PDE4BQ07343 736 aa16.63■□□□□ 0.25
CCM2-217ENST00000492883 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
CCM2-217ENST00000492883 WDR18Q9BV38 432 aa16.63■□□□□ 0.25
CCM2-217ENST00000492883 SAGE1Q9NXZ1 904 aa16.63■□□□□ 0.25
CCM2-217ENST00000492883 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
CCM2-217ENST00000492883 AKR1B1P15121 316 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 SEPT2Q15019 361 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
CCM2-217ENST00000492883 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 RAD50Q92878 1312 aa16.62■□□□□ 0.25
CCM2-217ENST00000492883 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 PRDM1O75626 825 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 TBC1D8O95759 1140 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 BACE1P56817 501 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 FEZ1Q99689 392 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 IL25Q9H293 177 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
CCM2-217ENST00000492883 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 ZNF213O14771 459 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 SGSM2O43147 1006 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 HSPA8P11142 646 aaKnown RBP16.6■□□□□ 0.25
CCM2-217ENST00000492883 RASA1P20936 1047 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 GUCY1A2P33402 732 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 LBX1P52954 281 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 HMGCS2P54868 508 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 HAND2P61296 217 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 MTMR2Q13614 643 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 ROBO3Q96MS0 1386 aa16.6■□□□□ 0.25
CCM2-217ENST00000492883 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 MYH7P12883 1935 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 PDHXO00330 501 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 MOGSQ13724 837 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
CCM2-217ENST00000492883 SH3D19Q5HYK7 790 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 ZFYVE28Q9HCC9 887 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
CCM2-217ENST00000492883 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 ZMYM6O95789 1325 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
CCM2-217ENST00000492883 CDC45O75419 566 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 ATP2B2Q01814 1243 aa16.58■□□□□ 0.24
CCM2-217ENST00000492883 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms