RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 PTPRZ1P23471 2315 aaPredicted RBP6.89□□□□□ -1.31
SEC13-219ENST00000492602 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 CTNND1O60716 968 aaKnown RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 DDX58O95786 925 aaKnown RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 IGKV5-2P06315 115 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 HOXB7P09629 217 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 SLURP2P0DP57 97 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 MYOGP15173 224 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 CSF2RAP15509 400 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 POU3F3P20264 500 aaPredicted RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 ID4P47928 161 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 RABGGTBP53611 331 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 RIPK4P57078 832 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 FAAP100Q0VG06 881 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 LRRC41Q15345 812 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 PSRC1Q6PGN9 363 aaPredicted RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 SAMD1Q6SPF0 538 aaPredicted RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 VPS37DQ86XT2 251 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.88□□□□□ -1.31
SEC13-219ENST00000492602 FAM86C1Q9NVL1 165 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 FAM198AQ9UFP1 575 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 MAP3K2Q9Y2U5 619 aa6.88□□□□□ -1.31
SEC13-219ENST00000492602 ZFHX2Q9C0A1 2572 aaPredicted RBP6.88□□□□□ -1.31
SEC13-219ENST00000492602 CHD7Q9P2D1 2997 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 BAHCC1Q9P281 2608 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ZNF318Q5VUA4 2279 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 MAST3O60307 1309 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ZNF521Q96K83 1311 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 POTEB3A0JP26 581 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 DCDC2CA8MYV0 355 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 CSF1RP07333 972 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 CYBAP13498 195 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 SLC5A1P13866 664 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 HERVK_113P62684 666 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ERVK-24P63145 666 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 CWF19L2Q2TBE0 894 aaKnown RBP6.87□□□□□ -1.31
SEC13-219ENST00000492602 IER5LQ5T953 404 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 WDR78Q5VTH9 848 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 CDC42EP5Q6NZY7 148 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 POTEBQ6S5H4 581 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ZSCAN29Q8IWY8 852 aaPredicted RBP6.87□□□□□ -1.31
SEC13-219ENST00000492602 TMEM199Q8N511 208 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 MTIF3Q9H2K0 278 aaKnown RBP6.87□□□□□ -1.31
SEC13-219ENST00000492602 RBPJLQ9UBG7 517 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 CHMP3Q9Y3E7 222 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 PTPRFP10586 1907 aa6.87□□□□□ -1.31
SEC13-219ENST00000492602 MYH3P11055 1940 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 ATRNL1Q5VV63 1379 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 H7C1W4 665 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 CHL1O00533 1208 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 SEPT4O43236 478 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
SEC13-219ENST00000492602 RGS20O76081 388 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 IL9P15248 144 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 PPP2R1AP30153 589 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 NEXNQ0ZGT2 675 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 TCF15Q12870 199 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 IFIT5Q13325 482 aaKnown RBP6.86□□□□□ -1.31
SEC13-219ENST00000492602 EPHA10Q5JZY3 1008 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 TOX2Q96NM4 488 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 PRRX2Q99811 253 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 PLA2G12BQ9BX93 195 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 CNNM1Q9NRU3 951 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 USP40Q9NVE5 1235 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 PHF24Q9UPV7 400 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 DCHS1Q96JQ0 3298 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 MYO15AQ9UKN7 3530 aa6.86□□□□□ -1.31
SEC13-219ENST00000492602 PI4KAP2A4QPH2 592 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 FGBP02675 491 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 SLC4A2P04920 1241 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 UBE4AQ14139 1066 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 TAF7LQ5H9L4 462 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 LDHAL6AQ6ZMR3 332 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 OTOP2Q7RTS6 562 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 ANKRD33Q7Z3H0 272 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 PI4KAP1Q8N8J0 262 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 ARNTL2Q8WYA1 636 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 ATOH1Q92858 354 aaPredicted RBP6.85□□□□□ -1.31
SEC13-219ENST00000492602 ZNF594Q96JF6 807 aaPredicted RBP6.85□□□□□ -1.31
SEC13-219ENST00000492602 PNNQ9H307 717 aaKnown RBP6.85□□□□□ -1.31
SEC13-219ENST00000492602 EPG5Q9HCE0 2579 aa6.85□□□□□ -1.31
SEC13-219ENST00000492602 CHD8Q9HCK8 2581 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 GAKO14976 1311 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 A0A1W2PQ45 241 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 A0A1W2PQY0 241 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 MED19A0JLT2 244 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 SOWAHBA6NEL2 793 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 DDTLA6NHG4 134 aaPredicted RBP6.84□□□□□ -1.31
SEC13-219ENST00000492602 EPOPA6NHQ4 379 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 SLC15A5A6NIM6 579 aa6.84□□□□□ -1.31
SEC13-219ENST00000492602 HOXC6P09630 235 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms